Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.4e-45 183.7 94 100.0
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 2.7e-27 125.2 71 90.1
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 3.2e-20 101.7 56 89.3
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 7.9e-19 97.1 56 83.9
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 1.8e-18 95.9 56 82.1
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 6.7e-18 94.0 55 81.8
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 6.7e-18 94.0 56 82.1
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 8.7e-18 93.6 92 57.6
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 5.7e-17 90.9 54 77.8
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 7.4e-17 90.5 56 75.0
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 9.7e-17 90.1 56 76.8
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 9.7e-17 90.1 56 76.8
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 9.7e-17 90.1 56 76.8
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 9.7e-17 90.1 55 78.2
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 1.3e-16 89.7 55 74.5
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 1.3e-16 89.7 56 76.8
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.3e-16 89.7 56 78.6
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.3e-16 89.7 56 78.6
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.6e-16 89.4 56 80.4
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 2.2e-16 89.0 56 76.8
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 2.2e-16 89.0 56 78.6
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 2.2e-16 89.0 56 75.0
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.2e-16 89.0 54 77.8
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.2e-16 89.0 54 77.8
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.2e-16 89.0 54 77.8
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 2.8e-16 88.6 56 75.0
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.8e-16 87.8 57 73.7
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.8e-16 87.8 57 73.7
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 8.2e-16 87.0 55 76.4
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 8.2e-16 87.0 56 73.2
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.8e-15 85.9 55 72.7
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.8e-15 85.9 84 53.6
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 1.8e-15 85.9 62 69.4
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 2.4e-15 85.5 54 75.9
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 2.4e-15 85.5 55 74.5
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 3.1e-15 85.1 54 75.9
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 3.1e-15 85.1 55 74.5
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 4.1e-15 84.7 57 75.4
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.1e-15 84.7 76 61.8
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 4.1e-15 84.7 56 71.4
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 4.1e-15 84.7 55 72.7
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 4.1e-15 84.7 59 67.8
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.3e-15 84.3 54 77.8
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 6.9e-15 84.0 54 74.1
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 6.9e-15 84.0 58 75.9
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 9.0e-15 83.6 55 72.7
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 9.0e-15 83.6 55 72.7
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 1.5e-14 82.8 49 81.6
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 1.5e-14 82.8 55 72.7
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 1.5e-14 82.8 54 74.1
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 2.0e-14 82.4 56 73.2
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 2.0e-14 82.4 50 80.0
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 2.0e-14 82.4 56 69.6
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 2.6e-14 82.0 56 69.6
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 3.4e-14 81.6 49 79.6
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 3.4e-14 81.6 49 79.6
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 3.4e-14 81.6 51 74.5
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 3.4e-14 81.6 55 70.9
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 3.4e-14 81.6 49 79.6
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 5.9e-14 80.9 47 80.9
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 3.8e-13 78.2 56 69.6
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.8e-13 78.2 50 72.0
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 1.1e-12 76.6 50 72.0
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 1.1e-12 76.6 47 74.5
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.9e-12 75.9 54 68.5
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 4.2e-12 74.7 56 66.1
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 5.5e-12 74.3 56 66.1
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 7.2e-12 73.9 47 72.3
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 1.2e-11 73.2 47 74.5
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 1.2e-11 73.2 47 74.5
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 1.6e-11 72.8 47 74.5
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 2.1e-11 72.4 57 66.7
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 2.1e-11 72.4 57 66.7
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 3.6e-11 71.6 56 64.3
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 4.6e-11 71.2 47 72.3
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 4.6e-11 71.2 47 72.3
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 5.7e-09 64.3 53 56.6
AUR62043409 Chenopodium quinoa HOM05D007841 ORTHO05D009919 3.7e-08 61.6 30 100.0
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 2.6e-06 55.5 48 54.2
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 4.5e-06 54.7 33 78.8


User provided reference genes

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