Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.6e-39 163.7 77 100.0
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.6e-38 161.0 77 97.4
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 7.6e-36 153.3 77 92.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 6.7e-32 140.2 74 83.8
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 8.7e-32 139.8 74 85.1
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 8.7e-32 139.8 74 83.8
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.9e-31 138.7 73 83.6
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 5.6e-31 137.1 74 81.1
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 1.3e-30 136.0 74 81.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.3e-30 136.0 74 81.1
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.3e-30 136.0 74 81.1
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-30 135.2 74 78.4
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.8e-30 134.8 75 77.3
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 2.8e-30 134.8 74 79.7
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.7e-30 134.4 74 79.7
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.7e-30 134.4 77 75.3
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.7e-30 134.4 77 75.3
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.7e-30 134.4 77 75.3
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 4.8e-30 134.0 74 79.7
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 4.8e-30 134.0 74 78.4
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.2e-30 133.7 75 76.0
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 8.1e-30 133.3 74 77.0
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 8.1e-30 133.3 73 78.1
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.1e-29 132.9 74 79.7
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.1e-29 132.9 74 79.7
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-29 132.9 74 77.0
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.4e-29 132.5 74 77.0
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.4e-29 132.5 74 75.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.4e-29 132.5 74 75.7
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.4e-29 132.5 74 75.7
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.8e-29 132.1 73 75.3
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.8e-29 132.1 74 79.7
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 2.4e-29 131.7 73 79.5
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.4e-29 131.7 74 77.0
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.1e-29 131.3 74 78.4
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 5.3e-29 130.6 77 75.3
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 6.9e-29 130.2 72 80.6
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 6.9e-29 130.2 74 78.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.2e-28 129.4 74 73.0
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 1.2e-28 129.4 74 75.7
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 1.2e-28 129.4 77 72.7
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.2e-28 129.4 74 77.0
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.5e-28 129.0 75 70.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 1.5e-28 129.0 75 73.3
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 1.5e-28 129.0 72 76.4
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.5e-28 129.0 75 74.7
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 2.6e-28 128.3 74 75.7
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 4.5e-28 127.5 73 75.3
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 5.8e-28 127.1 72 75.0
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 7.6e-28 126.7 73 75.3
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 2.2e-27 125.2 72 73.6
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 2.2e-27 125.2 73 72.6
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.9e-27 124.8 72 75.0
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 6.5e-27 123.6 71 73.2
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.5e-27 123.6 72 73.6
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 8.4e-27 123.2 74 70.3
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.4e-27 123.2 67 79.1
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.4e-27 123.2 67 79.1
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 1.1e-26 122.9 73 74.0
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 1.1e-26 122.9 69 76.8
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 79.7
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.4e-26 122.5 70 75.7
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.9e-26 122.1 74 68.9
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.5e-26 121.7 72 73.6
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.2e-26 121.3 72 72.2
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 4.2e-26 120.9 69 76.8
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 5.5e-26 120.6 69 76.8
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 7.1e-26 120.2 74 66.2
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 9.3e-26 119.8 72 70.8
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 9.3e-26 119.8 72 70.8
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 9.3e-26 119.8 72 70.8
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 9.3e-26 119.8 72 70.8
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.2e-25 119.4 71 73.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 70.8
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 70.8
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.6e-25 119.0 75 72.0
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 2.1e-25 118.6 65 76.9
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 2.7e-25 118.2 74 64.9
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 65.3
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.6e-25 117.5 71 66.2
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 4.6e-25 117.5 74 74.3
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 6.0e-25 117.1 72 70.8
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 6.0e-25 117.1 66 78.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.9e-25 116.7 72 70.8
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.8e-24 115.5 69 71.0
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.8e-24 115.5 69 71.0
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 2.3e-24 115.2 72 69.4
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 3.9e-24 114.4 67 71.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 5.1e-24 114.0 66 72.7
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 5.1e-24 114.0 66 72.7
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 5.1e-24 114.0 66 72.7
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.5e-23 112.5 72 62.5
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.5e-23 112.5 72 62.5
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.5e-23 112.5 72 62.5
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.5e-23 111.7 72 62.5
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.3e-23 110.9 72 68.1
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.3e-23 110.9 77 58.4
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.7e-23 110.5 62 74.2
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.4e-23 110.2 72 65.3
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.4e-23 110.2 72 65.3
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.3e-22 109.4 72 62.5
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.7e-22 107.8 74 60.8
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.3e-22 107.1 68 63.2
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-21 105.9 74 58.1
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.8e-21 105.5 74 58.1
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.8e-21 105.5 74 58.1
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.1e-21 104.8 60 71.7
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.1e-21 104.4 74 58.1
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.2e-20 102.8 69 60.9
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-20 102.4 69 59.4
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 2.0e-20 102.1 65 64.6
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.6e-20 101.7 70 57.1
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.2e-19 98.6 62 66.1
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.6e-17 92.4 74 60.8
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.6e-17 91.3 49 77.6
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.1e-15 86.3 58 65.5
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-15 86.3 48 75.0
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.3e-08 62.0 70 41.4
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 7.4e-07 57.0 71 40.8
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.8e-06 55.1 78 35.9


User provided reference genes

Program Settings