Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023219 Chenopodium quinoa HOM05D004062 ORTHO05D004417 8.1e-79 297.0 147 100.0
AUR62044612 Chenopodium quinoa HOM05D004062 ORTHO05D004417 8.1e-79 297.0 147 100.0
EL10Ac2g04523 Beta vulgaris HOM05D004062 ORTHO05D004417 2.0e-53 212.6 147 70.7
Ah.16g101490 Amaranthus hybridus HOM05D004062 ORTHO05D004417 7.4e-48 194.1 148 64.2
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 7.0e-22 107.8 141 44.0
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 9.1e-22 107.5 131 45.0
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.2e-18 97.1 130 43.8
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 1.4e-17 93.6 142 37.3
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.4e-17 93.6 147 39.5
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 2.3e-17 92.8 146 40.4
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 6.8e-17 91.3 146 38.4
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 1.5e-16 90.1 144 38.9
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 2.6e-16 89.4 149 37.6
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 3.4e-16 89.0 149 37.6
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.4e-16 89.0 147 36.1
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 2.2e-15 86.3 145 36.6
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 2.8e-15 85.9 147 34.7
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 3.7e-15 85.5 145 37.2
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 4.9e-15 85.1 147 40.8
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 4.9e-15 85.1 143 38.5
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 6.3e-15 84.7 140 35.7
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 6.3e-15 84.7 147 38.1
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 1.4e-14 83.6 145 32.4
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.4e-14 82.8 131 37.4
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 3.1e-14 82.4 145 37.9
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 3.1e-14 82.4 145 37.9
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 3.1e-14 82.4 145 37.9
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 9.2e-14 80.9 139 36.7
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.2e-13 80.5 131 35.9
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 5.9e-13 78.2 145 33.8
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 5.9e-13 78.2 142 33.8
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 7.8e-13 77.8 145 35.9
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 5.0e-12 75.1 151 37.7
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 5.0e-12 75.1 130 39.2
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 5.0e-12 75.1 147 35.4
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 6.6e-12 74.7 140 34.3
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.1e-11 73.9 134 36.6
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 1.1e-11 73.9 129 35.7
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 1.5e-11 73.6 148 36.5
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.5e-11 73.6 145 35.2
Oeu008332.1 Olea europaea HOM05D003529 ORTHO05D004106 1.5e-11 73.6 130 37.7
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.5e-11 73.6 126 39.7
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 1.9e-11 73.2 128 38.3
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 2.5e-11 72.8 147 36.7
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 3.3e-11 72.4 136 36.0
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 3.3e-11 72.4 146 34.2
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 3.3e-11 72.4 146 34.2
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.3e-11 72.0 149 32.2
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 4.3e-11 72.0 145 35.2
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 4.3e-11 72.0 145 35.2
FAN17G2092 Fragaria x ananassa HOM05D004062 ORTHO05D004417 7.3e-11 71.2 139 33.8
FAN07G0543 Fragaria x ananassa HOM05D004062 ORTHO05D004417 9.5e-11 70.9 139 33.8
Migut.L00492 Erythranthe guttata HOM05D004062 ORTHO05D004417 1.6e-10 70.1 135 33.3
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.8e-10 69.3 135 33.3
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 4.7e-10 68.6 135 34.8
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 4.7e-10 68.6 136 29.4
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 6.1e-10 68.2 129 34.1
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 8.0e-10 67.8 140 35.0
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 8.0e-10 67.8 131 33.6
FvH4_4g26630 Fragaria vesca HOM05D004062 ORTHO05D004417 1.0e-09 67.4 139 32.4
FAN12G4350 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.0e-09 67.4 139 32.4
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 1.0e-09 67.4 129 33.3
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.4e-09 67.0 141 31.9
FAN12G0456 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.4e-09 67.0 139 32.4
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.8e-09 66.6 136 30.9
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 4.0e-09 65.5 140 33.6
Ciclev10013069m.g Citrus clementina HOM05D004062 ORTHO05D004417 4.0e-09 65.5 127 37.0
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 5.2e-09 65.1 134 35.8
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 5.2e-09 65.1 140 31.4
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 6.8e-09 64.7 132 34.1
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 8.9e-09 64.3 90 38.9
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 1.2e-08 63.9 99 40.4
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.5e-08 63.5 134 32.8
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.5e-08 63.5 140 30.7
MELO3C017929.2 Cucumis melo HOM05D003529 ORTHO05D004106 2.6e-08 62.8 133 34.6
Dinv10056 Davidia involucrata HOM05D003529 ORTHO05D004106 2.6e-08 62.8 144 33.3
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 3.4e-08 62.4 90 42.2
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 3.4e-08 62.4 147 31.3
CsaV3_4G001080 Cucumis sativus L. HOM05D003529 ORTHO05D004106 4.4e-08 62.0 133 33.8
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 4.4e-08 62.0 137 34.3
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 4.4e-08 62.0 136 36.0
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 4.4e-08 62.0 136 36.0
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 5.8e-08 61.6 137 34.3
Migut.D00112 Erythranthe guttata HOM05D003529 ORTHO05D004106 7.5e-08 61.2 129 34.1
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 7.5e-08 61.2 129 31.8
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 7.5e-08 61.2 137 34.3
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 9.8e-08 60.8 94 39.4
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 1.3e-07 60.5 134 35.1
ClCG10G011190 Citrullus lanatus HOM05D003529 ORTHO05D004106 1.7e-07 60.1 135 33.3
Prupe.1G317700 Prunus persica HOM05D004062 ORTHO05D004417 1.7e-07 60.1 137 32.1
SGA_v2.0_scaffold334G49044 Striga asiatica HOM05D003529 ORTHO05D004106 1.7e-07 60.1 131 32.1
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.9e-07 59.3 140 33.6
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.9e-07 59.3 133 33.8
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 3.7e-07 58.9 90 40.0
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 3.7e-07 58.9 137 32.1
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 4.9e-07 58.5 151 35.8
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 4.9e-07 58.5 135 35.6
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 6.4e-07 58.2 128 32.8
Prupe.1G317600 Prunus persica HOM05D004062 ORTHO05D004417 8.3e-07 57.8 134 28.4
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.1e-06 57.4 137 32.1
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 1.9e-06 56.6 100 33.0
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 1.9e-06 56.6 100 33.0
Eucgr.B02857 Eucalyptus grandis HOM05D004062 ORTHO05D004417 1.9e-06 56.6 134 25.4
THA.LOC104817473 Tarenaya hassleriana HOM05D003529 ORTHO05D004106 1.9e-06 56.6 133 31.6
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 2.4e-06 56.2 136 27.9
Oeu006461.1 Olea europaea HOM05D003529 ORTHO05D004106 4.1e-06 55.5 136 30.1
Sabra02G0158400 Salix brachista HOM05D003529 ORTHO05D004106 5.4e-06 55.1 129 31.8
DCAR_010709 Daucus carota HOM05D004062 ORTHO05D004417 7.0e-06 54.7 145 33.1
CiPaw.05G243400 Carya illinoinensis HOM05D004062 ORTHO05D004417 9.2e-06 54.3 130 24.6
Hma1.2p1_0212F.1_g090160 Hydrangea macrophylla HOM05D003529 ORTHO05D004106 9.2e-06 54.3 130 31.5


User provided reference genes

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