Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.5e-91 338.2 162 100.0
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 9.9e-70 266.9 129 97.7
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 1.3e-61 240.0 129 86.8
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.5e-61 237.7 129 86.0
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.2e-60 235.0 129 83.7
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 9.3e-60 233.8 129 83.7
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.1e-56 222.6 129 78.3
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 3.7e-56 221.9 129 77.5
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 8.2e-56 220.7 129 76.0
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.4e-55 219.9 129 75.2
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.4e-55 219.2 130 75.4
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 2.4e-55 219.2 129 73.6
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 3.1e-55 218.8 129 75.2
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.3e-55 218.0 129 73.6
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.3e-55 218.0 129 73.6
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 5.3e-55 218.0 129 76.0
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 5.3e-55 218.0 129 75.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 9.0e-55 217.2 129 74.4
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 9.0e-55 217.2 129 74.4
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.2e-54 216.9 129 74.4
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 74.4
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 76.0
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 74.4
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 74.4
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 74.4
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.5e-54 216.5 129 76.0
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 2.0e-54 216.1 129 74.4
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.0e-54 216.1 129 76.0
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 2.6e-54 215.7 129 73.6
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 2.6e-54 215.7 129 75.2
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.4e-54 215.3 129 73.6
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 3.4e-54 215.3 129 74.4
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 4.5e-54 214.9 129 73.6
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 5.9e-54 214.5 129 76.0
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 5.9e-54 214.5 129 73.6
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 7.6e-54 214.2 129 73.6
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.7e-53 213.0 129 73.6
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 1.7e-53 213.0 129 74.4
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 2.2e-53 212.6 129 76.0
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.9e-53 212.2 129 73.6
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.9e-53 212.2 129 74.4
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 3.8e-53 211.8 129 73.6
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 3.8e-53 211.8 129 75.2
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 5.0e-53 211.5 129 75.2
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 6.5e-53 211.1 129 72.1
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 6.5e-53 211.1 129 71.3
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.1e-52 210.3 129 72.9
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 1.4e-52 209.9 129 72.9
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 1.4e-52 209.9 129 72.9
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 1.4e-52 209.9 129 72.1
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 1.4e-52 209.9 129 72.9
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 1.9e-52 209.5 129 72.9
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 1.9e-52 209.5 129 72.9
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 3.2e-52 208.8 130 72.3
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 4.2e-52 208.4 129 72.1
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 9.3e-52 207.2 129 71.3
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 9.3e-52 207.2 133 69.9
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.6e-51 206.5 129 72.1
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.1e-51 206.1 129 69.8
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.7e-51 205.7 129 72.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 2.7e-51 205.7 129 71.3
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 6.1e-51 204.5 131 69.5
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.0e-50 203.8 129 70.5
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.0e-50 203.8 129 69.8
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.3e-50 203.4 129 70.5
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.3e-50 202.6 129 70.5
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 2.3e-50 202.6 129 69.8
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.0e-50 202.2 131 70.2
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 3.0e-50 202.2 131 70.2
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.0e-50 202.2 129 69.0
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 1.1e-49 200.3 129 69.8
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.1e-49 200.3 129 68.2
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.9e-49 199.5 131 68.7
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 9.7e-49 197.2 129 69.8
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 6.3e-48 194.5 129 65.1
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 8.2e-48 194.1 133 68.4
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 8.2e-48 194.1 172 55.8
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.1e-47 193.7 129 65.9
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 1.4e-47 193.4 129 67.4
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 4.1e-47 191.8 129 67.4
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 6.9e-47 191.0 131 69.5
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.6e-46 189.1 127 66.1
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.0e-45 187.2 129 62.8
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.4e-44 183.3 129 62.8
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.0e-42 175.6 130 61.5
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 3.9e-42 175.3 109 72.5
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 3.9e-42 175.3 130 61.5
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 8.8e-42 174.1 130 60.8
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.5e-41 173.3 130 60.0
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 2.0e-41 172.9 130 58.5
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 2.0e-41 172.9 130 58.5
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 4.3e-41 171.8 130 58.5
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 4.3e-41 171.8 130 58.5
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 4.3e-41 171.8 130 58.5
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 9.7e-41 170.6 130 60.0
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 3.7e-40 168.7 130 58.5
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 2.4e-39 166.0 125 61.6
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 5.3e-39 164.9 130 57.7
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 5.3e-39 164.9 223 40.4
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 9.1e-39 164.1 124 57.3
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 2.6e-38 162.5 129 59.7
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 6.5e-37 157.9 129 55.0
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 6.5e-37 157.9 133 55.6
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.9e-36 156.4 128 54.7
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 9.4e-36 154.1 135 54.8
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 4.7e-35 151.8 155 51.0
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 3.3e-33 145.6 118 55.9
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 4.4e-33 145.2 129 50.4
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 6.3e-32 141.4 81 76.5
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.8e-31 139.8 129 52.7
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 2.4e-31 139.4 102 58.8
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.0e-30 136.3 129 51.9
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.6e-30 136.0 81 72.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 7.7e-30 134.4 79 75.9
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.4e-23 113.6 132 48.5
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 4.1e-23 112.1 63 76.2
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 7.0e-23 111.3 65 70.8
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 2.1e-19 99.8 72 68.1
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 4.0e-18 95.5 56 66.1
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 5.4e-15 85.1 119 36.1
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 4.2e-12 75.5 48 68.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 5.5e-12 75.1 48 66.7
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 7.2e-12 74.7 56 58.9
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.4e-10 70.5 50 62.0
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 3.0e-10 69.3 42 76.2


User provided reference genes

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