Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.2e-56 222.2 126 100.0
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 6.2e-51 204.1 126 91.3
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 8.3e-48 193.7 126 79.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 2.7e-46 188.7 126 77.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.4e-39 166.4 123 73.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 3.0e-37 158.7 118 68.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-36 156.8 119 67.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.9e-36 156.0 120 67.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.9e-36 156.0 119 66.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.3e-36 155.2 119 65.5
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.3e-36 155.2 119 65.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 5.6e-36 154.5 114 67.5
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.2e-35 153.3 123 64.2
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.6e-35 152.9 125 65.6
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.6e-35 152.9 117 66.7
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.6e-35 152.9 117 66.7
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.6e-35 152.9 119 64.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.6e-35 152.9 110 70.0
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.1e-35 152.5 119 64.7
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 3.6e-35 151.8 117 65.8
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 3.6e-35 151.8 117 65.8
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 4.7e-35 151.4 114 67.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-34 149.8 126 61.9
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-34 149.8 126 61.9
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.8e-34 149.4 117 65.0
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-34 148.3 119 64.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-34 148.3 119 64.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 6.8e-34 147.5 110 66.4
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 2.0e-33 146.0 114 65.8
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.0e-33 146.0 119 63.0
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.6e-33 145.6 119 62.2
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.6e-33 145.6 119 63.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.6e-33 145.6 126 61.9
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.4e-33 144.8 112 65.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 7.6e-33 144.1 114 64.9
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 7.6e-33 144.1 118 62.7
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 9.9e-33 143.7 125 60.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.3e-32 143.3 119 63.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 2.2e-32 142.5 112 63.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.2e-32 142.5 115 61.7
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 3.7e-32 141.7 114 60.5
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 3.7e-32 141.7 114 63.2
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 4.9e-32 141.4 111 64.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.9e-32 141.4 112 63.4
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 4.9e-32 141.4 112 62.5
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.9e-32 141.4 120 63.3
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 8.4e-32 140.6 112 63.4
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 8.4e-32 140.6 120 60.0
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 8.4e-32 140.6 107 66.4
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.1e-31 140.2 112 62.5
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.1e-31 140.2 112 63.4
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.1e-31 140.2 119 61.3
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.1e-31 140.2 116 64.7
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.1e-31 140.2 111 63.1
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.4e-31 139.8 112 61.6
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.4e-31 139.8 125 60.8
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.9e-31 139.4 111 63.1
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.9e-31 139.4 126 57.9
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.4e-31 139.0 107 65.4
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 4.1e-31 138.3 121 58.7
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 4.1e-31 138.3 115 60.9
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 5.4e-31 137.9 116 57.8
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 5.4e-31 137.9 116 61.2
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 9.2e-31 137.1 119 59.7
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.2e-30 136.7 118 60.2
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 2.1e-30 136.0 118 58.5
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.0e-30 134.4 114 59.6
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.0e-29 133.7 114 57.0
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 2.3e-29 132.5 116 57.8
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 5.1e-29 131.3 102 65.7
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.6e-29 131.0 107 58.9
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-28 130.2 97 68.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.6e-28 127.9 92 69.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.3e-28 127.5 110 59.1
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.2e-27 126.7 119 59.7
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.2e-27 126.7 122 54.1
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.8e-27 125.6 111 64.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 4.7e-27 124.8 97 64.9
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 8.1e-27 124.0 124 55.6
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.4e-26 123.2 116 61.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.4e-26 122.5 93 63.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 3.1e-26 122.1 125 60.8
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 5.8e-25 117.9 112 58.9
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 9.9e-25 117.1 93 61.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 9.9e-25 117.1 93 59.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.3e-24 116.7 116 52.6
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 3.8e-24 115.2 93 58.1
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.8e-24 115.2 107 50.5
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.1e-23 113.6 92 62.0
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.9e-23 112.8 109 56.0
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.4e-23 112.5 125 57.6
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.2e-22 110.2 90 62.2
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 2.1e-22 109.4 76 72.4
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.1e-22 109.4 90 63.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.0e-22 107.8 78 67.9
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 5.1e-21 104.8 76 69.7
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 2.5e-20 102.4 92 58.7
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.5e-20 102.4 122 55.7
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 5.6e-20 101.3 92 58.7
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 5.6e-20 101.3 95 63.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.8e-19 99.0 77 67.5
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.6e-19 98.6 73 67.1
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 4.8e-19 98.2 80 62.5
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 6.2e-19 97.8 78 60.3
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 6.2e-19 97.8 78 60.3
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.1e-18 97.1 87 54.0
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 6.9e-18 94.4 68 69.1
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 9.0e-18 94.0 117 41.9
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.5e-17 93.2 73 58.9
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 2.0e-17 92.8 76 57.9
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 2.0e-17 92.8 76 57.9
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.6e-17 92.4 73 58.9
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.6e-17 92.4 74 58.1
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 5.8e-17 91.3 71 59.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 5.8e-17 91.3 71 59.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 5.8e-17 91.3 71 59.2
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 7.6e-17 90.9 89 49.4
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.3e-16 90.1 73 56.2
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.9e-16 89.0 71 57.7
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.9e-16 89.0 71 57.7
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.8e-16 88.6 88 56.8
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.8e-16 88.6 59 72.9
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.8e-16 88.6 59 72.9
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 5.4e-15 84.7 78 55.1
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.5e-12 76.6 72 44.4
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.8e-11 72.4 93 38.7
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.3e-08 63.5 46 63.0
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.4e-07 60.1 44 65.9


User provided reference genes

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