Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023005 Chenopodium quinoa HOM05D000197 ORTHO05D000114 9.5e-49 196.4 93 100.0
AUR62023000 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.1e-32 140.2 156 53.8
AUR62044241 Chenopodium quinoa HOM05D000197 ORTHO05D000114 5.6e-25 117.5 131 54.2
AUR62009319 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.1e-24 113.6 152 44.7
AUR62009318 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.7e-21 105.9 61 75.4
EL10Ac2g04062 Beta vulgaris HOM05D000197 ORTHO05D000114 7.1e-20 100.5 61 68.9
EL10Ac1g01591 Beta vulgaris HOM05D000197 ORTHO05D000114 7.8e-19 97.1 142 45.1
AUR62009320 Chenopodium quinoa HOM05D000197 ORTHO05D000114 7.8e-19 97.1 108 49.1
EL10Ac1g01594 Beta vulgaris HOM05D000197 ORTHO05D000114 3.0e-18 95.1 58 69.0
AUR62023001 Chenopodium quinoa HOM05D000197 ORTHO05D000114 3.9e-18 94.7 52 78.8
AUR62023003 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.6e-18 93.6 60 71.7
AUR62044242 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.6e-18 93.6 100 55.0
AUR62044568 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.6e-18 93.6 60 71.7
EL10Ac2g04063 Beta vulgaris HOM05D000197 ORTHO05D000114 1.1e-15 86.7 145 37.2
Ah.16g105320 Amaranthus hybridus HOM05D000197 ORTHO05D000114 2.4e-15 85.5 60 60.0
AUR62023006 Chenopodium quinoa HOM05D000197 ORTHO05D000114 8.9e-15 83.6 129 43.4
AUR62009317 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.2e-14 83.2 55 65.5
AUR62023010 Chenopodium quinoa HOM05D000197 ORTHO05D000114 6.4e-13 77.4 60 58.3
AUR62009322 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.1e-12 76.6 60 55.0
AUR62009323 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.4e-12 76.3 60 55.0
AUR62023007 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.6e-11 72.8 75 44.0
AUR62023009 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.7e-10 69.3 59 49.2
CSS0030531 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 8.7e-10 67.0 53 56.6
Ah.01g014930 Amaranthus hybridus HOM05D000197 ORTHO05D000114 1.1e-09 66.6 77 40.3
CSS0043149 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 1.1e-09 66.6 53 56.6
QL05p028199 Quercus lobata HOM05D000197 ORTHO05D000114 7.3e-09 63.9 53 52.8
AUR62023002 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.3e-08 63.2 61 44.3
QL05p028032 Quercus lobata HOM05D000197 ORTHO05D000114 1.3e-08 63.2 58 46.6
Manes.17G079000 Manihot esculenta HOM05D000197 ORTHO05D000114 1.6e-08 62.8 53 47.2
QL05p028005 Quercus lobata HOM05D000197 ORTHO05D000114 1.6e-08 62.8 53 49.1
QL05p028021 Quercus lobata HOM05D000197 ORTHO05D000114 1.6e-08 62.8 53 49.1
Cfa014966 Carpinus fangiana HOM05D000197 ORTHO05D000114 2.1e-08 62.4 52 46.2
QL03p036910 Quercus lobata HOM05D000197 ORTHO05D000114 2.1e-08 62.4 53 49.1
QL03p033590 Quercus lobata HOM05D000197 ORTHO05D000114 3.6e-08 61.6 53 49.1
Gohir.A07G022164 Gossypium hirsutum HOM05D000197 ORTHO05D000114 4.8e-08 61.2 58 44.8
Gorai.001G024200 Gossypium raimondii HOM05D000197 ORTHO05D000114 6.2e-08 60.8 54 46.3
QL03p036876 Quercus lobata HOM05D000197 ORTHO05D000114 6.2e-08 60.8 53 47.2
TAR628G0729 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.2e-08 60.8 58 37.9
GSVIVG01011724001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.4e-07 59.7 52 44.2
GSVIVG01011729001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.4e-07 59.7 54 44.4
FvH4_4g32760 Fragaria vesca HOM05D000197 ORTHO05D000114 2.4e-07 58.9 54 48.1
FAN12G1963 Fragaria x ananassa HOM05D000197 ORTHO05D000114 2.4e-07 58.9 54 48.1
FAN17G1064 Fragaria x ananassa HOM05D000197 ORTHO05D000114 2.4e-07 58.9 54 48.1
Manes.15G129800 Manihot esculenta HOM05D000197 ORTHO05D000114 2.4e-07 58.9 50 50.0
Manes.17G079075 Manihot esculenta HOM05D000197 ORTHO05D000114 2.4e-07 58.9 53 47.2
Potri.008G131100 Populus trichocarpa HOM05D000197 ORTHO05D000114 2.4e-07 58.9 53 47.2
GSVIVG01011726001 Vitis vinifera HOM05D000197 ORTHO05D000114 3.1e-07 58.5 57 43.9
COL.COLO4_33684 Corchorus olitorius HOM05D000197 ORTHO05D000114 4.0e-07 58.2 53 49.1
Gohir.D02G140000 Gossypium hirsutum HOM05D000197 ORTHO05D000114 4.0e-07 58.2 57 45.6
Gorai.005G156800 Gossypium raimondii HOM05D000197 ORTHO05D000114 4.0e-07 58.2 57 45.6
AUR62023004 Chenopodium quinoa HOM05D000197 ORTHO05D000114 5.3e-07 57.8 120 35.0
AUR62044569 Chenopodium quinoa HOM05D000197 ORTHO05D000114 5.3e-07 57.8 120 35.0
COL.COLO4_13142 Corchorus olitorius HOM05D000197 ORTHO05D000114 5.3e-07 57.8 53 49.1
Haze_10953 Corylus avellana HOM05D000197 ORTHO05D000114 5.3e-07 57.8 53 49.1
Dinv28034 Davidia involucrata HOM05D000197 ORTHO05D000114 5.3e-07 57.8 53 47.2
Gohir.A03G115200 Gossypium hirsutum HOM05D000197 ORTHO05D000114 5.3e-07 57.8 57 45.6
Gohir.D07G023400 Gossypium hirsutum HOM05D000197 ORTHO05D000114 5.3e-07 57.8 54 44.4
QL03p033671 Quercus lobata HOM05D000197 ORTHO05D000114 5.3e-07 57.8 53 50.9
CSS0023020 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 6.9e-07 57.4 53 43.4
Haze_10956 Corylus avellana HOM05D000197 ORTHO05D000114 6.9e-07 57.4 53 47.2
Sabra08G0100000 Salix brachista HOM05D000197 ORTHO05D000114 6.9e-07 57.4 51 47.1
COL.COLO4_13145 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.0e-07 57.0 53 49.1
Haze_10960 Corylus avellana HOM05D000197 ORTHO05D000114 9.0e-07 57.0 57 43.9
QL05p028161 Quercus lobata HOM05D000197 ORTHO05D000114 9.0e-07 57.0 53 47.2
AUR62017453 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.2e-06 56.6 51 51.0
AUR62037852 Chenopodium quinoa HOM05D000197 ORTHO05D000001 1.2e-06 56.6 51 51.0
COL.COLO4_13127 Corchorus olitorius HOM05D000197 ORTHO05D000114 1.2e-06 56.6 56 46.4
COL.COLO4_13135 Corchorus olitorius HOM05D000197 ORTHO05D000114 1.2e-06 56.6 63 42.9
MD00G1063600 Malus domestica HOM05D000197 ORTHO05D000114 1.2e-06 56.6 56 41.1
MD13G1022900 Malus domestica HOM05D000197 ORTHO05D000114 1.2e-06 56.6 56 41.1
GSVIVG01011733001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.2e-06 56.6 61 44.3
CiPaw.06G033500 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.5e-06 56.2 53 41.5
AUR62021484 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.5e-06 56.2 51 49.0
COL.COLO4_13141 Corchorus olitorius HOM05D000197 ORTHO05D000114 1.5e-06 56.2 53 50.9
MELO3C006776.2 Cucumis melo HOM05D000197 ORTHO05D000114 1.5e-06 56.2 56 41.1
MD16G1024400 Malus domestica HOM05D000197 ORTHO05D000114 1.5e-06 56.2 53 50.9
MD16G1025300 Malus domestica HOM05D000197 ORTHO05D000114 1.5e-06 56.2 53 50.9
Potri.017G051100 Populus trichocarpa HOM05D000197 ORTHO05D000114 1.5e-06 56.2 51 43.1
Atru.chr11.697 Acer truncatum HOM05D000197 ORTHO05D000114 2.0e-06 55.8 50 50.0
CSS0016284 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 2.0e-06 55.8 53 41.5
CiPaw.07G069600 Carya illinoinensis HOM05D000197 ORTHO05D000114 2.0e-06 55.8 53 43.4
Ciclev10018174m.g Citrus clementina HOM05D000197 ORTHO05D000114 2.0e-06 55.8 57 45.6
MBI15_g00934_MAGBIO Magnolia biondii HOM05D000197 ORTHO05D000114 2.0e-06 55.8 54 42.6
MD13G1023000 Malus domestica HOM05D000197 ORTHO05D000114 2.0e-06 55.8 56 42.9
Manes.15G130200 Manihot esculenta HOM05D000197 ORTHO05D000114 2.0e-06 55.8 54 42.6
RcHm_v2.0_Chr4g0441741 Rosa chinensis HOM05D000197 ORTHO05D000114 2.0e-06 55.8 54 46.3
AUR62010976 Chenopodium quinoa HOM05D000197 ORTHO05D000114 2.6e-06 55.5 51 51.0
AUR62025226 Chenopodium quinoa HOM05D000197 ORTHO05D000114 2.6e-06 55.5 51 51.0
COL.COLO4_13121 Corchorus olitorius HOM05D000197 ORTHO05D000114 2.6e-06 55.5 56 44.6
Duzib251G0755 Durio zibethinus HOM05D000197 ORTHO05D000114 2.6e-06 55.5 58 44.8
Manes.15G129900 Manihot esculenta HOM05D000197 ORTHO05D000114 2.6e-06 55.5 53 43.4
Thecc.02G285500 Theobroma cacao HOM05D000197 ORTHO05D000114 2.6e-06 55.5 55 43.6
TWI53G1611 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 2.6e-06 55.5 50 46.0
Haze_10959 Corylus avellana HOM05D000197 ORTHO05D000114 3.4e-06 55.1 53 43.4
Dinv18608 Davidia involucrata HOM05D000197 ORTHO05D000114 3.4e-06 55.1 51 47.1
Dinv26224 Davidia involucrata HOM05D000197 ORTHO05D000114 3.4e-06 55.1 51 47.1
Sabra10G0081300 Salix brachista HOM05D000197 ORTHO05D000114 3.4e-06 55.1 51 47.1
TWI18G0825 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 3.4e-06 55.1 52 44.2
FvH4_4g32780 Fragaria vesca HOM05D000197 ORTHO05D000114 4.4e-06 54.7 54 46.3
FAN12G3567 Fragaria x ananassa HOM05D000197 ORTHO05D000114 4.4e-06 54.7 54 46.3
FAN22G1981 Fragaria x ananassa HOM05D000197 ORTHO05D000114 4.4e-06 54.7 54 46.3
MD11G1160200 Malus domestica HOM05D000197 ORTHO05D000114 4.4e-06 54.7 54 48.1
TAR369G1071 Trochodendron aralioides HOM05D000197 ORTHO05D000114 4.4e-06 54.7 53 47.2
Cpa.g.sc49.140 Carica papaya HOM05D000197 ORTHO05D000114 5.8e-06 54.3 60 43.3
CiPaw.06G046600 Carya illinoinensis HOM05D000197 ORTHO05D000114 5.8e-06 54.3 53 41.5
COL.COLO4_13116 Corchorus olitorius HOM05D000197 ORTHO05D000114 5.8e-06 54.3 57 42.1
COL.COLO4_13118 Corchorus olitorius HOM05D000197 ORTHO05D000114 5.8e-06 54.3 56 42.9
COL.COLO4_13129 Corchorus olitorius HOM05D000197 ORTHO05D000114 5.8e-06 54.3 56 44.6
COL.COLO4_13137 Corchorus olitorius HOM05D000197 ORTHO05D000114 5.8e-06 54.3 54 40.7
MD16G1024700 Malus domestica HOM05D000197 ORTHO05D000114 5.8e-06 54.3 53 49.1
Manes.17G079300 Manihot esculenta HOM05D000197 ORTHO05D000114 5.8e-06 54.3 53 43.4
RcHm_v2.0_Chr4g0392581 Rosa chinensis HOM05D000197 ORTHO05D000114 5.8e-06 54.3 60 41.7
Sc04g0008950 Simmondsia chinensis HOM05D000197 ORTHO05D000114 5.8e-06 54.3 58 41.4
Cfa014970 Carpinus fangiana HOM05D000197 ORTHO05D000114 7.6e-06 53.9 49 44.9
AUR62023008 Chenopodium quinoa HOM05D000197 ORTHO05D000114 7.6e-06 53.9 42 54.8
AUR62044243 Chenopodium quinoa HOM05D000197 ORTHO05D000114 7.6e-06 53.9 42 54.8
Ciclev10017039m.g Citrus clementina HOM05D000197 ORTHO05D000114 7.6e-06 53.9 57 45.6
Haze_10951 Corylus avellana HOM05D000197 ORTHO05D000114 7.6e-06 53.9 53 45.3
Haze_10952 Corylus avellana HOM05D000197 ORTHO05D000114 7.6e-06 53.9 53 45.3
FAN11G2700 Fragaria x ananassa HOM05D000197 ORTHO05D000114 7.6e-06 53.9 54 46.3
MD16G1025600 Malus domestica HOM05D000197 ORTHO05D000114 7.6e-06 53.9 53 49.1
Manes.17G079156 Manihot esculenta HOM05D000197 ORTHO05D000114 7.6e-06 53.9 53 43.4
Manes.17G079184 Manihot esculenta HOM05D000197 ORTHO05D000114 7.6e-06 53.9 53 43.4
RcHm_v2.0_Chr4g0392511 Rosa chinensis HOM05D000197 ORTHO05D000114 7.6e-06 53.9 60 40.0
Thecc.02G284800 Theobroma cacao HOM05D000197 ORTHO05D000114 7.6e-06 53.9 54 40.7
Thecc.02G285000 Theobroma cacao HOM05D000197 ORTHO05D000114 7.6e-06 53.9 54 40.7
CiPaw.06G047600 Carya illinoinensis HOM05D000197 ORTHO05D000114 9.9e-06 53.5 53 41.5
COL.COLO4_13140 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.9e-06 53.5 58 43.1
Glyma.15G274300 Glycine max HOM05D000197 ORTHO05D000114 9.9e-06 53.5 54 38.9
Manes.17G079732 Manihot esculenta HOM05D000197 ORTHO05D000114 9.9e-06 53.5 53 43.4
Sabra10G0081200 Salix brachista HOM05D000197 ORTHO05D000114 9.9e-06 53.5 51 45.1
Hund19510 Selenicereus undatus HOM05D000197 ORTHO05D000114 9.9e-06 53.5 67 34.3


User provided reference genes

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