Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 8.4e-97 357.1 186 100.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 1.9e-85 319.3 185 89.7
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.5e-74 283.1 154 96.8
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 2.0e-74 282.7 185 77.3
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 9.0e-67 257.3 185 71.4
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 3.4e-66 255.4 185 70.8
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.3e-65 253.4 186 70.4
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.4e-64 250.0 185 69.7
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.4e-64 250.0 186 70.4
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 2.5e-64 249.2 143 88.8
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 7.2e-64 247.7 185 68.6
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 2.1e-63 246.1 186 67.2
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 1.0e-62 243.8 181 69.6
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 1.4e-62 243.4 185 68.6
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.8e-62 243.0 185 68.6
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 2.3e-62 242.7 185 69.7
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 6.7e-62 241.1 185 67.0
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.5e-61 240.0 185 68.1
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 2.0e-61 239.6 185 67.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 2.5e-61 239.2 186 67.7
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 3.3e-61 238.8 175 70.9
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.3e-61 238.4 185 67.6
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 4.3e-61 238.4 185 67.0
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 4.3e-61 238.4 189 66.7
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 5.7e-61 238.0 185 63.8
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 7.4e-61 237.7 188 69.1
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 9.7e-61 237.3 184 64.7
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 1.7e-60 236.5 185 64.9
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 2.2e-60 236.1 185 66.5
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.2e-60 236.1 185 64.9
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 2.8e-60 235.7 186 67.2
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 2.8e-60 235.7 186 66.7
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 4.8e-60 235.0 184 65.2
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.4e-59 233.4 184 63.0
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 2.4e-59 232.6 188 62.8
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.4e-59 232.6 153 78.4
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.1e-59 232.3 184 62.5
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 5.3e-59 231.5 184 65.8
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 5.3e-59 231.5 185 62.7
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 6.9e-59 231.1 184 65.2
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 9.1e-59 230.7 221 57.9
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.2e-58 230.3 186 62.9
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 2.0e-58 229.6 186 63.4
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 3.4e-58 228.8 186 62.9
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 4.5e-58 228.4 187 65.2
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 5.9e-58 228.0 186 62.9
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 5.9e-58 228.0 188 61.2
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.9e-58 228.0 188 61.2
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 2.2e-57 226.1 187 63.6
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.2e-57 226.1 196 62.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.8e-57 225.3 188 61.2
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 5.0e-57 224.9 185 64.3
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 6.5e-57 224.6 170 68.8
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.5e-57 224.6 188 61.2
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 6.5e-57 224.6 154 70.1
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 6.5e-57 224.6 185 62.7
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 3.2e-56 222.2 185 63.2
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 5.5e-56 221.5 182 62.6
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 5.5e-56 221.5 185 63.2
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 5.5e-56 221.5 179 64.2
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.6e-55 219.9 193 61.7
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 3.6e-55 218.8 179 63.7
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 7.9e-55 217.6 187 61.5
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.4e-54 216.9 153 71.9
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 1.4e-54 216.9 177 62.1
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.4e-54 216.9 153 68.6
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 1.8e-54 216.5 186 61.3
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 2.3e-54 216.1 149 73.8
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 3.9e-54 215.3 189 61.9
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 8.8e-54 214.2 189 58.2
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 8.8e-54 214.2 159 70.4
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 8.8e-54 214.2 186 62.4
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 8.8e-54 214.2 185 61.1
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.5e-53 213.4 189 61.4
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.5e-53 213.4 156 67.3
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 7.4e-53 211.1 156 70.5
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 2.8e-52 209.1 152 71.1
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 4.8e-52 208.4 175 59.4
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 2.4e-51 206.1 177 62.7
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.2e-49 199.5 149 67.1
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.9e-49 199.1 213 52.1
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 6.5e-49 198.0 137 73.0
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 8.5e-49 197.6 154 63.0
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.5e-48 196.1 135 74.1
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 1.6e-47 193.4 177 57.6
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 1.6e-47 193.4 177 57.6
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 3.6e-47 192.2 165 61.8
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.8e-46 189.9 146 68.5
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 3.0e-46 189.1 146 65.1
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 3.9e-46 188.7 149 67.8
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 5.2e-46 188.3 157 58.6
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 6.3e-44 181.4 119 79.0
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 1.4e-43 180.3 152 61.8
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.8e-43 179.9 120 78.3
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.0e-42 176.4 147 61.2
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 4.5e-42 175.3 184 52.7
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 8.5e-41 171.0 102 79.4
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 9.4e-40 167.5 119 70.6
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 3.6e-39 165.6 112 69.6
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 6.1e-39 164.9 118 70.3
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.8e-38 163.3 167 55.1
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.8e-38 163.3 118 68.6
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 5.7e-37 158.3 117 67.5
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.1e-35 154.1 115 69.6
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 5.0e-33 145.2 187 45.5
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 9.4e-32 141.0 116 62.9
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.8e-30 136.7 107 62.6
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 1.4e-27 127.1 102 61.8
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 3.1e-27 125.9 145 46.2
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.5e-26 122.1 149 46.3
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.1e-24 117.5 132 52.3
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.2e-23 114.0 138 47.8
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.6e-18 97.1 119 41.2
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 1.9e-11 73.6 61 62.3
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 1.2e-10 70.9 139 29.5
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 1.9e-08 63.5 61 50.8
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 6.8e-06 55.1 43 60.5


User provided reference genes

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