Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 0.0e+00 1471.8 736 100.0
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 0.0e+00 1397.9 736 94.6
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1251.9 783 78.8
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1246.9 734 83.1
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1172.9 738 76.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 4.1e-304 1047.7 744 68.4
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 5.5e-301 1037.3 737 67.4
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 1.0e-299 1033.1 742 66.8
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 5.2e-299 1030.8 740 67.3
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 4.8e-297 1024.2 740 67.0
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 8.2e-297 1023.5 738 67.3
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 1.3e-294 1016.1 740 67.0
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 2.5e-293 1011.9 740 67.0
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 2.1e-292 1008.8 738 64.4
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 8.0e-292 1006.9 740 64.9
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 1.0e-291 1006.5 738 66.0
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.3e-291 1005.4 738 64.2
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 2.3e-291 1005.4 738 65.0
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 8.8e-291 1003.4 738 65.2
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 3.4e-290 1001.5 743 65.4
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 7.5e-290 1000.3 739 66.2
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.3e-289 999.6 738 64.0
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 1.3e-289 999.6 738 66.4
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.2e-289 998.8 739 65.8
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 6.3e-289 997.3 737 66.2
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 8.3e-289 996.9 742 65.4
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 1.4e-288 996.1 738 66.0
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 5.4e-288 994.2 743 65.5
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.2e-287 993.0 737 65.8
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 5.0e-286 987.6 738 64.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 8.5e-286 986.9 745 65.0
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 7.2e-285 983.8 805 61.1
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 1.6e-284 982.6 738 64.1
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.6e-284 982.6 733 65.1
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 6.1e-284 980.7 738 64.5
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 2.3e-283 978.8 738 64.0
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 8.8e-283 976.9 755 64.2
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 8.8e-283 976.9 739 63.7
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 8.8e-283 976.9 737 63.8
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.0e-282 975.7 746 62.5
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 5.7e-282 974.2 736 63.3
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 7.5e-282 973.8 741 63.2
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 1.7e-281 972.6 739 64.1
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 3.7e-281 971.5 739 62.7
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 4.9e-281 971.1 740 63.1
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 4.9e-281 971.1 740 63.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.1e-280 969.9 737 62.7
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 1.8e-280 969.1 742 62.5
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 2.4e-280 968.8 738 62.7
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 3.1e-280 968.4 772 62.7
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 4.1e-280 968.0 737 62.1
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 7.0e-280 967.2 738 64.6
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.2e-279 966.5 735 63.1
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 2.7e-279 965.3 738 61.8
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 5.9e-279 964.1 741 62.9
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.0e-278 963.4 734 63.8
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.7e-278 962.6 744 64.1
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 2.9e-278 961.8 737 62.0
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 3.8e-278 961.4 736 63.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.5e-277 959.5 736 63.0
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 2.5e-277 958.7 737 63.8
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 9.5e-277 956.8 735 62.4
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 2.1e-276 955.7 737 63.9
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.4e-275 953.0 740 62.3
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.8e-275 952.6 728 63.9
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 3.0e-275 951.8 740 62.2
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 5.2e-275 951.0 705 65.5
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 2.6e-274 948.7 737 63.2
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 2.6e-274 948.7 775 61.4
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 9.8e-274 946.8 737 62.8
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 1.7e-273 946.0 741 62.6
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 3.7e-273 944.9 742 62.1
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.0e-272 940.6 736 61.5
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.6e-271 939.5 696 65.8
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.6e-271 939.5 742 61.9
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 3.5e-271 938.3 699 65.1
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 5.0e-270 934.5 641 69.6
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.5e-269 932.9 825 58.2
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 2.5e-269 932.2 743 61.4
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 8.0e-268 927.2 740 62.2
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 1.4e-267 926.4 717 64.4
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.5e-261 905.6 755 59.7
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 9.5e-261 903.7 757 58.5
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 2.8e-260 902.1 747 61.4
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.6e-258 895.6 735 61.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.1e-256 890.2 746 57.0
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.0e-254 883.6 741 59.9
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 8.1e-252 874.0 750 56.5
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 6.8e-251 870.9 742 56.6
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 9.9e-242 840.5 700 60.7
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 3.8e-241 838.6 619 67.7
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 4.9e-241 838.2 777 56.1
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.6e-236 823.2 570 71.9
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.6e-231 806.6 630 63.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 5.3e-227 791.6 707 59.5
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 6.9e-219 764.6 762 49.6
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 9.0e-219 764.2 778 48.8
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 2.9e-209 732.6 781 47.4
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.5e-205 720.3 741 48.4
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 1.9e-205 719.9 595 63.0
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.7e-180 637.1 566 52.3
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.0e-174 617.8 480 63.8
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.1e-171 606.3 687 47.9
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 2.2e-148 530.4 789 39.7
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 1.7e-145 520.8 757 38.6
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.2e-141 508.1 388 65.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.4e-123 448.0 474 51.9
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.8e-103 380.6 298 65.1
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 4.3e-96 356.7 399 47.4
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 4.8e-95 353.2 291 61.9
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.6e-90 338.2 246 61.8
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.2e-85 322.0 244 63.9
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.7e-79 301.6 197 70.6
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.2e-79 301.2 188 73.9
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.1e-78 298.9 186 74.2
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 3.4e-77 293.9 421 38.5
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.0e-76 292.4 217 58.5
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.8e-73 281.6 203 59.1
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 4.8e-71 273.5 248 58.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.1e-67 262.3 147 79.6
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.8e-47 194.5 131 61.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.5e-24 119.0 165 40.0
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 5.6e-11 73.9 73 57.5
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 5.2e-09 67.4 53 64.2


User provided reference genes

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