Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 3.6e-118 428.3 227 100.0
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 8.4e-75 284.3 210 76.2
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 2.5e-71 272.7 208 75.5
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 7.2e-58 228.0 202 63.4
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.8e-48 196.8 217 55.3
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.8e-48 196.8 192 56.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 2.3e-48 196.4 217 55.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 3.7e-46 189.1 237 53.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 4.8e-46 188.7 208 56.7
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.1e-45 187.6 242 48.3
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.8e-45 186.8 227 52.4
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 3.1e-45 186.0 182 61.5
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 3.1e-45 186.0 216 50.0
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 9.1e-45 184.5 229 52.8
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 2.0e-44 183.3 227 51.5
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.0e-44 183.3 248 45.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.0e-44 183.3 223 52.5
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.9e-44 181.8 227 48.9
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 7.7e-44 181.4 215 54.4
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.3e-43 180.6 214 54.2
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 1.7e-43 180.3 233 48.9
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.2e-43 179.9 230 50.0
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.9e-43 179.5 229 48.9
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.9e-43 179.5 238 49.6
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.8e-43 179.1 224 51.8
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 3.8e-43 179.1 211 51.7
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 5.0e-43 178.7 229 50.2
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.1e-42 177.6 244 45.5
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.1e-42 177.6 224 48.2
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 1.5e-42 177.2 201 52.2
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.5e-42 177.2 176 59.1
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.2e-42 176.0 238 49.2
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 5.5e-42 175.3 233 47.2
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 7.2e-42 174.9 242 45.9
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.7e-41 172.2 228 49.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.7e-41 172.2 254 44.9
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.4e-40 170.6 237 47.7
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.4e-40 170.6 168 57.7
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.8e-40 170.2 195 54.4
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.8e-40 170.2 237 47.7
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.8e-40 170.2 237 47.7
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.0e-40 169.5 122 71.3
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 4.0e-40 169.1 183 54.6
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 5.2e-40 168.7 200 54.0
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 5.2e-40 168.7 204 52.5
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 5.2e-40 168.7 208 50.0
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 8.8e-40 167.9 238 47.9
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 8.8e-40 167.9 195 53.8
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 8.8e-40 167.9 146 64.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.5e-39 167.2 229 48.9
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.0e-39 166.8 199 52.8
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 3.3e-39 166.0 231 48.1
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 4.4e-39 165.6 146 65.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.2e-38 163.3 105 79.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.2e-38 163.3 105 79.0
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.2e-38 163.3 238 47.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 6.3e-38 161.8 178 56.2
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 8.2e-38 161.4 202 50.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.8e-37 160.2 231 48.1
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 4.1e-37 159.1 140 62.1
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 4.1e-37 159.1 193 51.8
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 4.1e-37 159.1 187 52.4
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.1e-37 159.1 201 51.7
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 5.3e-37 158.7 173 55.5
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 5.3e-37 158.7 227 46.3
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.6e-36 157.1 199 49.7
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 3.5e-36 156.0 229 45.9
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 5.9e-36 155.2 143 59.4
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 5.9e-36 155.2 205 49.3
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.0e-35 154.5 218 47.2
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.7e-35 153.7 127 62.2
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.7e-35 153.7 127 62.2
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.2e-35 153.3 196 49.5
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.9e-35 152.9 137 62.0
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.9e-35 152.9 127 62.2
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 2.9e-35 152.9 136 63.2
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.8e-35 152.5 114 67.5
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 3.8e-35 152.5 114 67.5
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 3.8e-35 152.5 114 67.5
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.8e-35 152.5 114 67.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 5.0e-35 152.1 150 58.0
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 6.5e-35 151.8 200 48.5
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 6.5e-35 151.8 229 43.2
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 6.5e-35 151.8 208 49.0
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 1.5e-34 150.6 227 45.4
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 1.9e-34 150.2 201 50.2
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 3.2e-34 149.4 197 48.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 3.2e-34 149.4 215 45.1
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 5.5e-34 148.7 198 46.0
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.6e-33 146.0 215 47.9
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 8.0e-33 144.8 196 48.0
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.0e-32 144.4 196 50.5
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 4.0e-32 142.5 227 44.1
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.2e-31 141.0 203 46.3
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.0e-31 140.2 112 65.2
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 2.0e-31 140.2 162 54.9
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 5.7e-31 138.7 126 62.7
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.2e-28 131.0 170 48.2
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 3.5e-28 129.4 96 71.9
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.5e-28 129.0 214 42.5
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 5.9e-28 128.6 207 43.5
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 1.7e-27 127.1 165 49.7
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 2.1e-25 120.2 140 53.6
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 6.8e-24 115.2 174 47.1
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 4.4e-23 112.5 83 65.1
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.3e-19 100.9 172 45.3
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 5.0e-19 99.0 143 47.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 6.6e-19 98.6 233 34.3
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 5.8e-07 58.9 120 39.2
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 2.9e-06 56.6 116 36.2
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 6.4e-06 55.5 86 38.4


User provided reference genes

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