Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 9.0e-240 833.2 419 100.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 3.0e-203 711.8 409 86.3
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 2.3e-174 615.9 419 73.3
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 9.2e-168 594.0 424 70.5
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 5.2e-163 578.2 484 62.8
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 6.8e-147 524.6 444 62.2
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.4e-144 516.9 459 58.6
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 7.1e-144 514.6 440 60.2
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.2e-143 513.8 436 61.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.2e-143 513.8 442 59.7
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 4.6e-143 511.9 445 58.9
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.3e-142 510.4 434 61.1
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 3.0e-142 509.2 434 61.1
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 3.3e-141 505.8 441 59.4
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 9.6e-141 504.2 420 60.5
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.8e-140 502.7 415 59.8
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 4.7e-140 501.9 436 58.9
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 8.1e-140 501.1 435 59.5
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 1.4e-139 500.4 427 59.3
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 3.1e-139 499.2 441 58.3
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 9.0e-139 497.7 410 61.5
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 2.0e-138 496.5 409 61.6
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 4.4e-138 495.4 448 58.3
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 4.2e-136 488.8 436 58.0
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 9.3e-136 487.6 395 60.8
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.7e-135 486.1 408 59.8
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 4.6e-135 485.3 408 60.0
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.3e-134 483.8 408 59.6
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.7e-134 483.4 451 57.0
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 5.1e-134 481.9 427 58.3
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 8.7e-134 481.1 406 58.6
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.5e-133 480.3 444 56.8
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.9e-133 479.9 427 58.1
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 3.3e-133 479.2 427 57.6
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 4.3e-133 478.8 421 58.4
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 9.6e-133 477.6 427 57.8
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.6e-132 476.9 427 57.4
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.1e-132 476.5 412 59.5
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.1e-131 474.2 409 58.7
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.8e-131 473.4 421 58.4
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.0e-131 472.2 421 58.4
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 9.0e-131 471.1 428 56.3
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 9.0e-131 471.1 428 56.5
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.2e-130 470.7 411 60.1
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.6e-130 469.5 430 55.8
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 3.4e-130 469.2 429 57.1
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 4.5e-130 468.8 416 56.0
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 7.6e-130 468.0 424 57.8
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 9.9e-130 467.6 440 56.4
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 1.3e-129 467.2 429 58.0
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 2.2e-129 466.5 430 56.3
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.2e-129 466.5 365 64.7
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 4.9e-129 465.3 428 55.8
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.9e-129 465.3 410 60.0
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 4.9e-129 465.3 418 57.9
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 6.4e-129 464.9 431 55.0
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 2.4e-128 463.0 433 53.6
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 5.4e-128 461.8 412 55.8
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 2.7e-127 459.5 429 54.1
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 6.0e-127 458.4 416 56.0
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 7.9e-127 458.0 416 57.2
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 1.0e-126 457.6 424 55.0
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.3e-126 457.2 420 55.0
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 1.3e-126 457.2 444 55.4
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.8e-126 456.8 411 55.2
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 3.0e-126 456.1 409 58.2
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 5.1e-126 455.3 418 56.5
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.5e-125 453.8 418 55.0
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.9e-125 453.4 443 55.1
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 5.6e-125 451.8 427 54.8
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.1e-124 449.9 417 55.2
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 3.7e-124 449.1 413 57.9
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 8.1e-124 448.0 431 53.4
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 6.9e-123 444.9 300 70.3
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 7.6e-122 441.4 417 54.7
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 7.6e-122 441.4 402 56.2
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 9.9e-122 441.0 400 57.8
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.3e-121 440.7 429 52.7
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 2.9e-121 439.5 430 52.1
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 3.8e-121 439.1 408 56.1
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.1e-120 437.6 421 53.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 2.4e-120 436.4 399 56.4
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 4.6e-119 432.2 440 53.6
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 1.3e-118 430.6 418 53.8
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 1.1e-115 421.0 423 49.9
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.8e-115 420.2 483 50.7
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.5e-114 417.2 404 56.9
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 2.1e-111 406.8 434 52.1
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 3.5e-111 406.0 358 58.9
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.5e-111 406.0 423 53.0
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 2.3e-110 403.3 424 52.6
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 4.3e-109 399.1 300 62.7
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 4.3e-109 399.1 411 48.2
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 8.2e-108 394.8 406 48.3
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 3.3e-101 372.9 419 48.9
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 2.2e-100 370.2 437 47.8
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.4e-99 367.5 380 53.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 2.0e-90 337.0 328 51.8
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 2.0e-90 337.0 416 42.5
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-84 315.8 304 56.6
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 2.0e-74 283.9 437 41.2
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 2.8e-60 236.9 240 52.1
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 7.8e-58 228.8 329 41.3
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.7e-57 227.6 302 41.1
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 1.1e-56 224.9 155 67.1
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 5.2e-54 216.1 383 39.2
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 4.4e-53 213.0 155 70.3
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 2.9e-52 210.3 274 40.9
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 5.4e-51 206.1 340 33.8
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 7.0e-51 205.7 261 42.9
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.0e-49 201.8 149 63.1
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.0e-46 189.9 373 33.8
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.7e-42 177.2 144 56.2
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 6.0e-42 176.0 218 49.1
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 2.8e-39 167.2 149 56.4
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 6.8e-38 162.5 160 53.1
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 2.2e-36 157.5 158 49.4
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 7.3e-32 142.5 330 32.4
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.0e-21 107.8 256 27.0
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 6.6e-17 92.8 194 28.9
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 2.1e-15 87.8 106 42.5
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 2.8e-15 87.4 61 60.7
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.1e-14 85.5 61 60.7


User provided reference genes

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