Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.6e-146 521.9 249 100.0
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.0e-141 505.8 249 96.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.5e-104 383.3 245 75.1
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 9.5e-104 380.6 244 73.4
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.2e-103 380.2 245 73.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.7e-103 378.3 245 71.0
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 4.7e-103 378.3 244 72.5
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 8.0e-103 377.5 250 70.8
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.4e-102 376.7 245 71.8
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 1.5e-101 373.2 250 70.4
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 9.8e-101 370.5 245 71.0
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 2.2e-100 369.4 245 70.2
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.7e-100 368.6 245 70.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 4.9e-100 368.2 245 70.6
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.9e-100 368.2 245 69.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.4e-99 366.7 245 69.4
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 3.2e-99 365.5 250 69.2
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 4.1e-99 365.2 250 70.0
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 4.1e-99 365.2 243 69.1
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.4e-99 364.8 245 69.0
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 5.4e-99 364.8 245 69.0
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 7.0e-99 364.4 245 67.8
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.0e-99 364.4 245 67.8
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.2e-98 363.6 245 69.0
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.0e-98 362.8 245 67.8
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 2.7e-98 362.5 244 68.9
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 5.9e-98 361.3 245 68.6
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 5.9e-98 361.3 245 67.3
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 7.8e-98 360.9 245 66.5
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 7.8e-98 360.9 245 69.8
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.5e-96 356.7 245 67.3
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 1.9e-96 356.3 250 66.8
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.3e-96 355.5 246 68.3
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 3.3e-96 355.5 245 66.9
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 9.5e-96 354.0 247 66.8
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 9.5e-96 354.0 249 66.7
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 9.5e-96 354.0 251 67.3
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 9.5e-96 354.0 246 67.9
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 2.8e-95 352.4 245 66.9
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.8e-95 352.4 245 67.3
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 3.6e-95 352.1 247 66.4
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 3.6e-95 352.1 245 63.7
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 1.1e-94 350.5 245 66.9
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.1e-94 349.0 245 66.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 5.2e-94 348.2 250 65.6
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 5.2e-94 348.2 245 66.1
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 5.2e-94 348.2 247 65.2
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 6.8e-94 347.8 246 66.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.2e-93 347.1 247 63.2
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 2.0e-93 346.3 247 64.0
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.4e-93 345.1 246 65.9
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 5.8e-93 344.7 247 64.4
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 5.8e-93 344.7 245 66.5
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 5.8e-93 344.7 245 66.1
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 5.8e-93 344.7 246 65.9
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 7.5e-93 344.4 245 65.7
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 7.5e-93 344.4 245 64.1
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.3e-92 343.6 247 63.6
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.7e-92 343.2 247 64.0
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 2.2e-92 342.8 246 65.0
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 4.9e-92 341.7 247 63.6
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 8.3e-92 340.9 244 64.8
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 8.3e-92 340.9 246 65.0
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.4e-91 340.1 246 64.6
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 5.4e-91 338.2 245 65.7
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 7.0e-91 337.8 245 64.5
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.2e-90 337.0 245 64.1
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 1.2e-90 337.0 247 62.8
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 3.5e-90 335.5 247 63.2
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 4.6e-90 335.1 245 64.5
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 7.8e-90 334.3 247 61.9
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 7.8e-90 334.3 247 61.9
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 7.8e-90 334.3 247 61.9
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 7.8e-90 334.3 247 61.9
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 7.8e-90 334.3 246 65.0
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 7.8e-90 334.3 247 62.3
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.0e-89 334.0 248 63.3
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.0e-89 334.0 247 62.3
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 3.0e-89 332.4 247 61.5
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 3.9e-89 332.0 247 60.7
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 5.0e-89 331.6 246 63.0
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 8.6e-89 330.9 247 63.2
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 8.6e-89 330.9 247 61.1
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 8.6e-89 330.9 247 61.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 1.1e-88 330.5 247 61.9
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.9e-88 329.7 246 63.4
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 1.2e-87 327.0 245 64.9
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 2.8e-87 325.9 246 63.8
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 1.8e-86 323.2 247 61.1
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 8.9e-86 320.9 246 61.4
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 3.4e-85 318.9 250 62.4
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 4.4e-85 318.5 245 60.4
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 3.7e-84 315.5 228 64.9
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 4.9e-84 315.1 257 58.0
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 8.3e-84 314.3 245 58.8
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 6.0e-82 308.1 245 58.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 5.1e-81 305.1 236 58.5
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 5.1e-81 305.1 245 58.4
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 3.1e-78 295.8 246 58.5
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-77 293.5 236 59.3
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 1.7e-76 290.0 198 64.6
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.4e-75 286.2 249 57.0
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 7.1e-75 284.6 249 56.6
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.4e-70 270.4 244 53.7
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 6.2e-63 245.0 249 46.6
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 6.4e-60 235.0 250 46.0
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 9.3e-59 231.1 266 44.4
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.4e-56 221.5 149 66.4
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.6e-50 203.8 261 46.0
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.6e-50 203.8 282 45.7
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 2.5e-48 196.4 134 70.1
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.9e-40 170.2 110 70.9
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 6.5e-36 155.2 99 74.7
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.5e-29 134.0 69 81.2
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 4.7e-26 122.5 95 58.9
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 8.5e-20 101.7 55 76.4
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 9.4e-19 98.2 89 57.3
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 7.4e-16 88.6 49 73.5
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 9.7e-16 88.2 151 41.7
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 3.6e-10 69.7 185 27.6
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.6e-10 69.7 39 74.4
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 2.6e-08 63.5 97 37.1
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 4.1e-06 56.2 102 32.4


User provided reference genes

Program Settings