Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 6.5e-144 514.2 297 100.0
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 8.4e-75 284.6 203 86.7
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.1e-47 194.5 233 53.2
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 3.6e-33 146.4 271 49.4
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.8e-32 144.1 240 50.0
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 1.5e-31 141.0 223 50.2
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 7.0e-29 132.1 201 45.3
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 9.1e-29 131.7 220 49.1
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 2.7e-28 130.2 223 52.9
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 7.7e-28 128.6 231 46.8
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 6.6e-27 125.6 223 49.8
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 8.6e-27 125.2 222 52.7
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.1e-26 124.8 213 50.2
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 7.2e-26 122.1 185 45.4
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 7.2e-26 122.1 165 50.9
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 9.5e-26 121.7 201 51.7
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 2.1e-25 120.6 230 43.5
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 2.8e-25 120.2 121 57.9
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 6.1e-25 119.0 226 50.4
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 6.1e-25 119.0 197 46.7
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 6.1e-25 119.0 211 48.8
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 6.1e-25 119.0 214 41.1
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 8.0e-25 118.6 190 51.1
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.0e-24 118.2 176 48.9
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.0e-24 118.2 160 45.6
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 3.0e-24 116.7 214 40.2
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 3.0e-24 116.7 233 39.9
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 4.0e-24 116.3 238 42.0
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 5.2e-24 115.9 162 45.1
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 6.8e-24 115.5 224 46.0
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 8.9e-24 115.2 239 43.9
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 8.9e-24 115.2 182 46.7
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.5e-23 114.4 215 46.0
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.6e-23 113.6 208 47.1
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 2.6e-23 113.6 254 42.5
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.6e-23 113.6 172 48.3
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 3.4e-23 113.2 239 38.5
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.4e-23 113.2 202 50.5
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 4.4e-23 112.8 215 46.0
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 4.4e-23 112.8 163 54.6
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 4.4e-23 112.8 234 41.9
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 4.4e-23 112.8 197 38.1
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 5.7e-23 112.5 242 40.1
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 5.7e-23 112.5 183 48.6
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 5.7e-23 112.5 200 40.5
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 7.5e-23 112.1 215 46.0
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.7e-22 110.9 139 56.1
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 3.7e-22 109.8 241 43.6
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 3.7e-22 109.8 180 42.8
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 4.9e-22 109.4 236 42.4
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 4.9e-22 109.4 173 42.8
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 8.3e-22 108.6 216 50.5
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 8.3e-22 108.6 154 57.1
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 8.3e-22 108.6 154 41.6
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.4e-21 107.8 159 45.3
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 1.8e-21 107.5 278 33.1
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 3.2e-21 106.7 117 50.4
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 4.1e-21 106.3 180 41.1
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 7.0e-21 105.5 108 64.8
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 7.0e-21 105.5 225 35.6
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 7.0e-21 105.5 235 40.9
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 9.2e-21 105.1 204 47.1
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 2.0e-20 104.0 238 39.9
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 2.0e-20 104.0 215 44.2
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.7e-20 103.6 113 72.6
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.7e-20 103.6 192 41.7
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 3.5e-20 103.2 177 54.2
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 1.0e-19 101.7 96 57.3
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.0e-19 101.7 158 49.4
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.3e-19 101.3 210 46.7
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 1.7e-19 100.9 176 47.2
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 3.9e-19 99.8 106 66.0
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 5.0e-19 99.4 98 70.4
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 5.0e-19 99.4 130 58.5
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 1.9e-18 97.4 230 42.2
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.5e-18 97.1 175 50.3
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 5.6e-18 95.9 180 47.8
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 5.6e-18 95.9 246 39.4
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 7.3e-18 95.5 150 44.7
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 2.8e-17 93.6 118 59.3
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 4.7e-17 92.8 195 40.5
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 4.7e-17 92.8 195 40.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 4.7e-17 92.8 58 77.6
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 4.7e-17 92.8 61 72.1
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 6.1e-17 92.4 174 49.4
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 6.1e-17 92.4 195 41.5
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 8.0e-17 92.0 141 46.1
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 8.0e-17 92.0 168 46.4
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 8.0e-17 92.0 168 46.4
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 8.0e-17 92.0 261 42.5
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 8.0e-17 92.0 144 52.1
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.3e-16 90.5 204 37.3
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.1e-16 90.1 204 37.3
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 3.1e-16 90.1 168 43.5
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 4.0e-16 89.7 144 44.4
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 6.8e-16 89.0 173 46.8
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 2.0e-15 87.4 131 55.0
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 7.5e-15 85.5 214 39.7
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 7.5e-15 85.5 141 44.7
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.2e-14 84.0 170 45.3
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 2.9e-14 83.6 161 42.9
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 9.2e-13 78.6 158 39.2
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 6.0e-12 75.9 169 43.2
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 7.8e-12 75.5 60 60.0
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 7.8e-12 75.5 179 41.3
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 1.5e-10 71.2 123 48.0
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 9.5e-10 68.6 230 30.4
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 4.7e-09 66.2 195 30.3
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 8.0e-09 65.5 34 91.2
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.1e-08 65.1 105 40.0
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 1.8e-08 64.3 63 50.8
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 4.0e-08 63.2 283 32.2


User provided reference genes

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