Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 1.9e-84 315.8 169 100.0
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 1.2e-70 270.0 171 86.0
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 2.3e-29 132.9 184 53.3
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 1.3e-11 73.9 142 36.6
CARHR142080 Cardamine hirsuta HOM05D008433 ORTHO05D009918 6.0e-09 65.1 176 36.4
CDE06G1173 Ceratophyllum demersum HOM05D051512 ORTHO05D009918 6.0e-09 65.1 137 34.3
TAR629G1417 Trochodendron aralioides HOM05D008433 ORTHO05D009918 6.0e-09 65.1 170 32.4
BcaB06g29468 Brassica carinata HOM05D008433 ORTHO05D009918 1.0e-08 64.3 139 38.1
BcaC02g07009 Brassica carinata HOM05D008433 ORTHO05D009918 1.0e-08 64.3 139 38.1
Hma1.2p1_1697F.1_g298100 Hydrangea macrophylla HOM05D008433 ORTHO05D009918 1.7e-08 63.5 144 36.1
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 3.0e-08 62.8 90 42.2
Carub.0004s2944 Capsella rubella HOM05D008433 ORTHO05D009918 3.9e-08 62.4 139 36.7
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 3.9e-08 62.4 148 35.8
Sc26g0000460 Simmondsia chinensis HOM05D008433 ORTHO05D009918 3.9e-08 62.4 99 41.4
Rhsim01G0179000 Rhododendron simsii HOM05D008433 ORTHO05D009918 5.1e-08 62.0 193 32.1
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 6.6e-08 61.6 141 37.6
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 8.6e-08 61.2 127 37.0
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 1.1e-07 60.8 78 48.7
AT2G46735 Arabidopsis thaliana HOM05D008433 ORTHO05D009918 1.5e-07 60.5 164 39.0
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 1.5e-07 60.5 115 39.1
AL4G46200 Arabidopsis lyrata HOM05D008433 ORTHO05D009918 2.5e-07 59.7 178 36.5
CsaV3_6G008920 Cucumis sativus L. HOM05D029570 ORTHO05D009918 3.3e-07 59.3 139 32.4
C04p72390 Brassica napus HOM05D008433 ORTHO05D009918 7.3e-07 58.2 144 36.1
BolC4t28725H Brassica oleracea HOM05D008433 ORTHO05D009918 7.3e-07 58.2 144 36.1
MBI12_g42093_MAGBIO Magnolia biondii HOM05D008433 ORTHO05D009918 7.3e-07 58.2 131 35.9
A04p34600 Brassica napus HOM05D008433 ORTHO05D009918 1.2e-06 57.4 141 36.2
BraA04t18918Z Brassica rapa HOM05D008433 ORTHO05D009918 1.2e-06 57.4 141 36.2
Actinidia28092 Actinidia chinensis HOM05D013717 ORTHO05D009918 1.6e-06 57.0 176 31.2
Nitab4.5_0003094g0050 Nicotiana tabacum HOM05D018587 ORTHO05D009918 1.6e-06 57.0 199 32.7
BcaC02g07007 Brassica carinata HOM05D008433 ORTHO05D009918 2.8e-06 56.2 141 36.2
CDE04G3055 Ceratophyllum demersum HOM05D051512 ORTHO05D009918 2.8e-06 56.2 106 36.8
FAN01G0488 Fragaria x ananassa HOM05D013717 ORTHO05D009918 2.8e-06 56.2 185 30.8
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 6.2e-06 55.1 171 32.7
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 6.2e-06 55.1 157 35.0
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 8.1e-06 54.7 166 32.5
FAN10G3789 Fragaria x ananassa HOM05D013717 ORTHO05D009918 8.1e-06 54.7 151 33.8


User provided reference genes

Program Settings