Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022648 Chenopodium quinoa HOM05D017651 ORTHO05D011420 1.6e-291 1005.4 515 100.0
AUR62044752 Chenopodium quinoa HOM05D017651 ORTHO05D011420 3.6e-275 951.0 515 96.1
AUR62022647 Chenopodium quinoa HOM05D017651 ORTHO05D011420 9.6e-268 926.4 515 93.8
AUR62004614 Chenopodium quinoa HOM05D017651 ORTHO05D011420 2.5e-231 805.4 466 90.3
EL10Ac1g00124 Beta vulgaris HOM05D017651 ORTHO05D011420 1.7e-171 606.7 518 66.0
Ah.05g178450 Amaranthus hybridus HOM05D017651 ORTHO05D011420 5.3e-149 531.9 519 61.5
Sc23g0001460 Simmondsia chinensis HOM05D017651 ORTHO05D011420 3.4e-47 193.7 455 33.0
Prupe.1G553900 Prunus persica HOM05D003905 ORTHO05D011420 7.3e-34 149.4 425 33.2
RcHm_v2.0_Chr7g0228011 Rosa chinensis HOM05D003905 ORTHO05D011420 3.4e-31 140.6 436 30.3
TAR381G0253 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.2e-28 132.1 545 26.2
FAN08G2565 Fragaria x ananassa HOM05D003905 ORTHO05D011420 2.3e-27 127.9 421 30.4
FAN18G0158 Fragaria x ananassa HOM05D003905 ORTHO05D011420 2.3e-27 127.9 414 30.2
FvH4_5g32010 Fragaria vesca HOM05D003905 ORTHO05D011420 8.7e-27 125.9 414 30.0
Cfa012940 Carpinus fangiana HOM05D003905 ORTHO05D011420 2.1e-25 121.3 455 27.3
TAR624G1117 Trochodendron aralioides HOM05D003905 ORTHO05D011420 2.4e-24 117.9 417 29.0
Haze_21293 Corylus avellana HOM05D003905 ORTHO05D011420 5.3e-24 116.7 423 28.4
FAN04G1043 Fragaria x ananassa HOM05D003905 ORTHO05D011420 2.6e-23 114.4 553 26.4
Duzib177G1174 Durio zibethinus HOM05D003905 ORTHO05D011420 1.3e-22 112.1 392 27.8
TAR624G0280 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.9e-18 98.2 391 28.6
Actinidia01556 Actinidia chinensis HOM05D003905 ORTHO05D011420 9.6e-18 95.9 430 26.3
TAR381G0315 Trochodendron aralioides HOM05D003905 ORTHO05D005329 5.5e-13 80.1 398 27.4
TAR381G1218 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.2e-12 79.0 394 27.7
CiPaw.08G067200 Carya illinoinensis HOM05D003905 ORTHO05D005329 5.1e-11 73.6 383 28.5
Oeu006588.1 Olea europaea HOM05D019587 ORTHO05D011420 5.1e-11 73.6 394 25.6
Sed0012955 Sechium edule HOM05D003905 ORTHO05D005329 6.7e-11 73.2 382 25.1
Manes.02G197000 Manihot esculenta HOM05D003905 ORTHO05D011420 8.7e-11 72.8 379 24.0
CiPaw.07G148100 Carya illinoinensis HOM05D003905 ORTHO05D005329 1.5e-10 72.0 384 28.6
MBI05_g23390_MAGBIO Magnolia biondii HOM05D003905 ORTHO05D005329 2.5e-10 71.2 363 27.0
ATR0579G136 Amborella trichopoda HOM05D003905 ORTHO05D005329 9.7e-10 69.3 381 28.1
unitig_8.g3383 Utricularia gibba HOM05D003905 ORTHO05D005329 2.2e-09 68.2 369 27.9
Medtr1g025500 Medicago truncatula HOM05D003905 ORTHO05D005329 2.8e-09 67.8 404 25.7
ClCG05G018200 Citrullus lanatus HOM05D003905 ORTHO05D005329 8.2e-09 66.2 529 23.4
Atru.chr13.267 Acer truncatum HOM05D003905 ORTHO05D005329 2.4e-08 64.7 388 25.8
CsaV3_3G045950 Cucumis sativus L. HOM05D003905 ORTHO05D005329 2.4e-08 64.7 488 23.8
MELO3C003744.2 Cucumis melo HOM05D003905 ORTHO05D005329 3.1e-08 64.3 384 26.0
Lj4C22T7 Lonicera japonica HOM05D003905 ORTHO05D005329 5.3e-08 63.5 209 31.1
Migut.C00854 Erythranthe guttata HOM05D003905 ORTHO05D005329 6.9e-08 63.2 335 27.5
TPR.G26376 Trifolium pratense HOM05D003905 ORTHO05D005329 1.2e-07 62.4 395 25.8
Lalb_Chr23g0266101 Lupinus albus HOM05D003905 ORTHO05D005329 2.0e-07 61.6 127 39.4
Psat6g002200 Pisum sativum HOM05D003905 ORTHO05D005329 2.0e-07 61.6 404 25.7
Ca_13435_v3 Cicer arietinum L. HOM05D003905 ORTHO05D005329 2.6e-07 61.2 372 25.0
Cfa013971 Carpinus fangiana HOM05D003905 ORTHO05D005329 3.4e-07 60.8 379 26.6
DCAR_016728 Daucus carota HOM05D003905 ORTHO05D005329 4.5e-07 60.5 153 34.0
VMungo0647G0001 Vigna mungo HOM05D003905 ORTHO05D005329 4.5e-07 60.5 141 38.3
Ah.11g039850 Amaranthus hybridus HOM05D003905 ORTHO05D005329 5.9e-07 60.1 170 35.3
TWI56G0857 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 5.9e-07 60.1 408 24.8
Sed0006884 Sechium edule HOM05D003905 ORTHO05D005329 7.7e-07 59.7 508 23.6
Hma1.2p1_0023F.1_g015570 Hydrangea macrophylla HOM05D003905 ORTHO05D005329 1.0e-06 59.3 557 23.5
Nitab4.5_0005970g0010 Nicotiana tabacum HOM05D003905 ORTHO05D005329 1.0e-06 59.3 272 28.3
Nitab4.5_0000337g0040 Nicotiana tabacum HOM05D003905 ORTHO05D005329 1.3e-06 58.9 429 25.9
COL.COLO4_26128 Corchorus olitorius HOM05D003905 ORTHO05D005329 1.7e-06 58.5 378 26.7
SalBow7G0836 Salvia bowleyana HOM05D003905 ORTHO05D005329 1.7e-06 58.5 365 26.6
TAR376G0902 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.7e-06 58.5 237 27.8
Duzib093G0852 Durio zibethinus HOM05D003905 ORTHO05D005329 3.8e-06 57.4 390 25.4
QL02p011991 Quercus lobata HOM05D003905 ORTHO05D005329 3.8e-06 57.4 396 25.3
Nitab4.5_0003251g0050 Nicotiana tabacum HOM05D003905 ORTHO05D005329 5.0e-06 57.0 303 24.8
SalBow7G2555 Salvia bowleyana HOM05D019587 ORTHO05D011420 5.0e-06 57.0 310 25.2
Dinv39531 Davidia involucrata HOM05D003905 ORTHO05D005329 6.5e-06 56.6 478 24.9
Lalb_Chr11g0061811 Lupinus albus HOM05D003905 ORTHO05D005329 6.5e-06 56.6 135 35.6
Phvul.001G005400 Phaseolus vulgaris HOM05D003905 ORTHO05D005329 6.5e-06 56.6 138 34.1
Sc15g0004870 Simmondsia chinensis HOM05D003905 ORTHO05D005329 6.5e-06 56.6 342 27.8


User provided reference genes

Program Settings