Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.3e-114 416.4 209 100.0
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 9.1e-84 313.9 215 71.6
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 3.8e-82 308.5 247 66.0
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 4.0e-79 298.5 244 63.9
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 2.6e-78 295.8 235 65.1
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 4.4e-78 295.0 237 62.0
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 5.7e-78 294.7 234 62.8
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 9.8e-78 293.9 235 63.4
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 1.7e-77 293.1 242 62.8
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 2.8e-77 292.4 234 62.8
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 4.9e-77 291.6 244 61.1
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 6.3e-77 291.2 243 61.3
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 5.4e-76 288.1 243 61.7
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 7.0e-76 287.7 244 60.7
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 7.0e-76 287.7 245 59.2
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 7.0e-76 287.7 243 60.1
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 9.2e-76 287.3 245 61.2
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 9.2e-76 287.3 244 61.1
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 9.2e-76 287.3 234 62.8
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 1.2e-75 287.0 240 60.8
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 1.2e-75 287.0 235 62.1
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.2e-75 287.0 235 61.3
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 2.0e-75 286.2 238 59.7
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 3.5e-75 285.4 245 59.2
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 3.5e-75 285.4 244 59.4
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 4.5e-75 285.0 238 60.1
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 4.5e-75 285.0 245 59.2
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 4.5e-75 285.0 242 61.6
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 5.9e-75 284.6 238 59.7
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 7.8e-75 284.3 238 60.1
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 1.3e-74 283.5 238 59.7
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 2.9e-74 282.3 243 60.1
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 2.9e-74 282.3 235 61.3
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 3.9e-74 282.0 238 62.6
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 5.0e-74 281.6 238 59.2
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 6.6e-74 281.2 245 58.8
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 1.1e-73 280.4 236 61.0
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 1.9e-73 279.6 245 58.8
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 1.9e-73 279.6 243 57.6
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 2.5e-73 279.3 233 59.7
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 4.3e-73 278.5 235 59.6
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 5.6e-73 278.1 243 58.8
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 9.5e-73 277.3 244 58.2
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 1.2e-72 276.9 242 59.5
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 1.6e-72 276.6 240 59.2
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 1.6e-72 276.6 242 58.7
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.1e-72 276.2 240 57.5
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 2.1e-72 276.2 244 57.4
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 2.8e-72 275.8 242 59.1
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 2.8e-72 275.8 242 58.3
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 2.8e-72 275.8 236 58.9
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 2.8e-72 275.8 243 58.0
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 3.6e-72 275.4 233 59.7
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 3.6e-72 275.4 226 60.2
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 4.7e-72 275.0 233 58.8
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 4.7e-72 275.0 236 58.9
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 1.0e-71 273.9 233 60.1
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.4e-71 273.5 243 58.4
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 2.3e-71 272.7 234 58.5
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 2.3e-71 272.7 233 58.8
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 3.1e-71 272.3 239 59.0
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 3.1e-71 272.3 235 58.7
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 4.0e-71 271.9 218 62.4
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 5.2e-71 271.6 233 57.5
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 5.2e-71 271.6 243 58.4
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 6.8e-71 271.2 233 57.9
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 8.9e-71 270.8 233 58.4
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 8.9e-71 270.8 243 58.8
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 1.5e-70 270.0 233 58.4
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 2.0e-70 269.6 280 53.9
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 2.6e-70 269.2 231 56.7
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 9.8e-70 267.3 139 97.1
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.9e-68 263.1 233 56.7
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 4.1e-68 261.9 233 55.8
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.2e-67 260.4 263 56.7
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 7.8e-67 257.7 243 55.6
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 1.7e-66 256.5 238 54.2
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.0e-66 255.0 234 57.7
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 5.0e-66 255.0 245 55.5
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 6.6e-66 254.6 267 52.4
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 8.6e-66 254.2 227 57.7
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 1.9e-65 253.1 234 56.8
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 5.6e-65 251.5 235 56.2
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 5.6e-65 251.5 236 54.2
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 7.3e-65 251.1 240 55.0
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 2.1e-64 249.6 204 62.7
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 4.0e-63 245.4 201 61.7
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 6.8e-63 244.6 200 62.5
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 1.2e-62 243.8 202 61.9
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 2.0e-62 243.0 236 53.0
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 9.8e-62 240.7 236 53.0
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 2.9e-61 239.2 167 71.3
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 6.4e-61 238.0 195 60.5
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.4e-60 236.9 239 49.0
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 9.2e-60 234.2 214 58.4
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 9.2e-60 234.2 190 62.1
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 4.6e-59 231.9 192 60.4
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 6.0e-59 231.5 237 51.1
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.3e-58 230.3 239 48.5
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 5.1e-58 228.4 206 54.9
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 1.5e-57 226.9 206 53.9
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 9.5e-57 224.2 238 47.1
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.2e-56 223.8 212 56.1
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 1.2e-56 223.8 254 51.2
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 1.6e-56 223.4 207 56.0
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 1.6e-56 223.4 207 56.0
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 8.1e-56 221.1 207 55.1
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 2.3e-55 219.5 207 54.6
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 6.8e-55 218.0 235 44.7
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 2.0e-54 216.5 144 70.1
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 2.6e-54 216.1 177 60.5
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 4.9e-53 211.8 157 64.3
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 9.2e-52 207.6 139 70.5
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 9.2e-52 207.6 210 54.3
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.2e-51 207.2 237 43.9
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.7e-51 206.1 206 49.0
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 1.0e-50 204.1 195 53.3
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 3.0e-50 202.6 186 54.8
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 9.5e-49 197.6 217 47.5
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 1.6e-48 196.8 236 48.7
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 6.8e-47 191.4 136 66.2
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 5.8e-46 188.3 164 56.7
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.3e-45 187.2 194 51.5
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 2.9e-45 186.0 183 52.5
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 6.4e-45 184.9 227 44.9
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.9e-44 183.3 191 47.6
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-42 177.2 213 43.7
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 6.6e-42 174.9 108 74.1
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 3.6e-40 169.1 171 56.1
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.1e-39 167.5 213 46.9
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.2e-37 159.8 103 70.9
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 2.2e-37 159.8 214 38.8
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 8.4e-37 157.9 199 43.7
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 1.0e-34 151.0 104 66.3
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 6.6e-34 148.3 197 45.7
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 2.5e-33 146.4 105 66.7
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 2.5e-33 146.4 166 50.6
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 9.3e-28 127.9 127 56.7
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 3.5e-27 125.9 234 35.0
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 1.5e-25 120.6 78 67.9
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.3e-24 117.5 99 57.6
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.1e-23 114.4 144 43.8
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 5.1e-18 95.5 83 57.8
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 3.3e-17 92.8 67 64.2
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-13 79.7 81 46.9
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 3.0e-10 69.7 65 56.9
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 2.5e-09 66.6 107 31.8
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.5e-09 66.6 82 42.7
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 8.2e-08 61.6 127 29.9
FAN14G1154 Fragaria x ananassa HOM05D004805 ORTHO05D005756 4.5e-06 55.8 79 40.5
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.0e-05 54.7 80 40.0


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