Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 3.0e-207 724.9 368 100.0
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 8.3e-64 248.4 177 69.5
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.9e-55 220.7 175 66.3
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 3.9e-53 213.0 174 60.9
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 3.9e-53 213.0 174 60.3
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 8.6e-53 211.8 175 60.0
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.5e-52 210.3 173 61.3
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 5.6e-52 209.1 166 60.2
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 7.3e-52 208.8 173 56.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.6e-51 207.6 175 57.7
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.8e-51 206.8 174 58.6
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.8e-51 206.8 175 59.4
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.8e-51 206.8 172 58.1
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.7e-51 206.1 178 59.0
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 6.2e-51 205.7 178 59.0
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.4e-50 204.5 174 60.3
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.4e-50 204.5 173 56.6
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.8e-50 204.1 172 57.6
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 2.3e-50 203.8 175 56.0
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.3e-50 203.8 179 54.2
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.1e-50 203.4 172 58.1
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 5.2e-50 202.6 175 59.4
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 5.2e-50 202.6 175 56.6
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 6.8e-50 202.2 173 56.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.9e-50 201.8 175 56.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.2e-49 201.4 176 56.2
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.5e-49 201.1 176 56.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.5e-49 201.1 172 57.6
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.4e-49 199.9 176 55.7
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.2e-48 197.2 175 54.9
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 2.2e-48 197.2 175 56.6
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 2.9e-48 196.8 175 56.0
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.7e-48 196.4 175 60.0
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 4.9e-48 196.1 173 59.5
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-47 194.9 175 55.4
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.1e-47 194.9 177 56.5
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.1e-47 194.9 174 56.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.4e-47 194.5 174 55.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.4e-47 194.5 173 54.3
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.4e-47 194.5 174 55.2
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.9e-47 194.1 174 57.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.2e-47 193.4 174 58.0
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.2e-47 193.4 175 52.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 5.4e-47 192.6 175 54.9
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.4e-47 192.6 175 54.9
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.1e-47 192.2 175 55.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 9.2e-47 191.8 174 56.9
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.6e-46 191.0 173 57.8
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 2.7e-46 190.3 176 54.5
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 6.0e-46 189.1 178 54.5
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.8e-46 188.7 175 53.7
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.0e-45 188.3 173 57.2
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.0e-45 188.3 175 53.7
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.0e-45 188.3 175 53.7
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.0e-45 188.3 170 55.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.7e-45 187.6 174 56.9
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.7e-45 187.6 174 56.9
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 2.3e-45 187.2 169 58.6
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 3.0e-45 186.8 180 51.7
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 5.1e-45 186.0 177 55.4
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 6.6e-45 185.7 176 54.5
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.1e-44 184.9 179 51.4
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 3.3e-44 183.3 180 50.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 9.5e-44 181.8 178 56.2
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.2e-43 181.4 172 55.8
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 3.6e-43 179.9 179 52.5
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 8.1e-43 178.7 168 55.4
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.8e-42 177.6 172 54.7
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.8e-42 177.6 178 50.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 3.1e-42 176.8 160 55.0
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 5.2e-42 176.0 161 55.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.5e-41 174.5 171 55.0
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.0e-41 174.1 177 49.2
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.4e-41 173.3 176 50.0
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 4.4e-41 172.9 172 53.5
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 5.8e-41 172.6 164 53.0
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-36 158.3 166 52.4
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.1e-36 158.3 174 48.3
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.5e-36 157.9 155 49.7
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.9e-36 157.5 174 45.4
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 7.3e-36 155.6 172 46.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.5e-33 147.9 169 45.0
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.0e-33 147.5 170 45.9
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 7.6e-33 145.6 172 47.7
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.7e-32 144.4 171 41.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 8.4e-32 142.1 178 46.6
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.9e-31 141.0 162 47.5
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.2e-31 139.8 168 44.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.0e-29 135.2 180 42.2
AUR62036405 Chenopodium quinoa HOM05D000929 ORTHO05D004813 1.7e-29 134.4 164 56.7
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 8.7e-29 132.1 180 43.9
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 3.6e-27 126.7 163 44.8
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 5.3e-26 122.9 163 38.0
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.7e-24 117.9 118 69.5
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 4.3e-20 103.2 111 50.5
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 5.6e-20 102.8 152 41.4
AUR62038814 Chenopodium quinoa HOM05D001879 ORTHO05D007648 9.0e-18 95.5 192 45.8
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 3.8e-16 90.1 151 39.1
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 9.3e-15 85.5 68 61.8
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.6e-14 84.7 177 30.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 4.5e-09 66.6 54 50.0
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.0e-08 65.5 39 66.7
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 2.9e-08 63.9 39 69.2
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 2.9e-08 63.9 101 39.6
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.9e-07 61.2 72 47.2
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 7.9e-06 55.8 49 49.0


User provided reference genes

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