Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022433 Chenopodium quinoa HOM05D007162 ORTHO05D007631 5.0e-78 294.3 140 100.0
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.9e-65 251.9 126 92.9
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.4e-64 248.8 125 95.2
AUR62032772 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.4e-64 248.8 125 95.2
EL10Ac3g05554 Beta vulgaris HOM05D007162 ORTHO05D007631 2.6e-58 228.8 125 84.8
Gohir.D10G181300 Gossypium hirsutum HOM05D007162 ORTHO05D007631 1.2e-47 193.4 125 69.6
Gorai.011G202800 Gossypium raimondii HOM05D007162 ORTHO05D007631 1.2e-47 193.4 125 69.6
Gohir.A10G174800 Gossypium hirsutum HOM05D007162 ORTHO05D007631 1.6e-47 193.0 125 68.8
Manes.03G207900 Manihot esculenta HOM05D007162 ORTHO05D007631 6.0e-47 191.0 123 70.7
Duzib151G0437 Durio zibethinus HOM05D007162 ORTHO05D007631 7.8e-47 190.7 123 69.9
MSTRG.10171 Avicennia marina HOM05D007162 ORTHO05D007631 2.3e-46 189.1 125 68.8
Duzib212G0788 Durio zibethinus HOM05D007162 ORTHO05D007631 3.0e-46 188.7 123 69.1
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 3.9e-46 188.3 125 68.0
Sc13g0007060 Simmondsia chinensis HOM05D007162 ORTHO05D007631 6.6e-46 187.6 125 68.8
TWI09G0041 Tripterygium wilfordii HOM05D007162 ORTHO05D007631 1.1e-45 186.8 123 70.7
CiPaw.01G134400 Carya illinoinensis HOM05D007162 ORTHO05D007631 2.5e-45 185.7 123 70.7
Nitab4.5_0002150g0050 Nicotiana tabacum HOM05D007162 ORTHO05D007631 5.6e-45 184.5 125 66.4
Prupe.1G112700 Prunus persica HOM05D007162 ORTHO05D007631 5.6e-45 184.5 125 66.4
Nitab4.5_0002294g0120 Nicotiana tabacum HOM05D007162 ORTHO05D007631 9.6e-45 183.7 125 66.4
MD13G1148700 Malus domestica HOM05D007162 ORTHO05D007631 1.2e-44 183.3 125 67.2
Peaxi162Scf01160g00150 Petunia axillaris HOM05D007162 ORTHO05D007631 1.6e-44 183.0 125 67.2
Cfa015679 Carpinus fangiana HOM05D007162 ORTHO05D007631 2.1e-44 182.6 124 70.2
Lj3P834T54 Lonicera japonica HOM05D007162 ORTHO05D007631 2.8e-44 182.2 125 65.6
MD16G1149000 Malus domestica HOM05D007162 ORTHO05D007631 4.7e-44 181.4 125 66.4
Gorai.002G031500 Gossypium raimondii HOM05D007162 ORTHO05D007631 6.2e-44 181.0 125 64.8
Oeu046586.1 Olea europaea HOM05D007162 ORTHO05D007631 6.2e-44 181.0 125 64.0
vmacro07965 Vaccinium macrocarpon HOM05D007162 ORTHO05D007631 1.1e-43 180.3 125 64.8
Gohir.A01G035600 Gossypium hirsutum HOM05D007162 ORTHO05D007631 1.4e-43 179.9 125 63.2
COL.COLO4_34567 Corchorus olitorius HOM05D007162 ORTHO05D007631 1.8e-43 179.5 123 67.5
FvH4_4g20690 Fragaria vesca HOM05D007162 ORTHO05D007631 1.8e-43 179.5 126 65.1
RcHm_v2.0_Chr4g0426111 Rosa chinensis HOM05D007162 ORTHO05D007631 2.4e-43 179.1 126 65.9
THA.LOC104818869 Tarenaya hassleriana HOM05D007162 ORTHO05D007631 3.1e-43 178.7 123 65.9
FAN07G2689 Fragaria x ananassa HOM05D007162 ORTHO05D007631 5.2e-43 177.9 126 65.1
Glyma.09G032600 Glycine max HOM05D007162 ORTHO05D007631 5.2e-43 177.9 125 63.2
Gohir.D01G023577 Gossypium hirsutum HOM05D007162 ORTHO05D007631 5.2e-43 177.9 125 64.0
Thecc.04G306200 Theobroma cacao HOM05D007162 ORTHO05D007631 5.2e-43 177.9 123 67.5
PGSC0003DMG400004614 Solanum tuberosum HOM05D007162 ORTHO05D007631 6.9e-43 177.6 125 66.4
Rhsim04G0242300 Rhododendron simsii HOM05D007162 ORTHO05D007631 8.9e-43 177.2 125 64.0
CAN.G484.72 Capsicum annuum HOM05D007162 ORTHO05D007631 1.2e-42 176.8 125 66.4
Atru.chr4.3114 Acer truncatum HOM05D007162 ORTHO05D007631 1.5e-42 176.4 122 67.2
Actinidia18474 Actinidia chinensis HOM05D007162 ORTHO05D007631 2.0e-42 176.0 125 64.8
FAN12G3043 Fragaria x ananassa HOM05D007162 ORTHO05D007631 2.6e-42 175.6 126 65.9
Solyc12g099170.3 Solanum lycopersicum HOM05D007162 ORTHO05D007631 2.6e-42 175.6 124 66.1
Sopen12g033850 Solanum pennellii HOM05D007162 ORTHO05D007631 2.6e-42 175.6 124 66.1
Lsat_1_v5_gn_1_40801 Lactuca sativa HOM05D007162 ORTHO05D007631 3.4e-42 175.3 127 65.4
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 3.4e-42 175.3 125 68.8
Glyma.15G137700 Glycine max HOM05D007162 ORTHO05D007631 1.7e-41 172.9 125 63.2
Hma1.2p1_0013F.1_g008260 Hydrangea macrophylla HOM05D007162 ORTHO05D007631 1.7e-41 172.9 126 63.5
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 2.2e-41 172.6 125 68.0
Hma1.2p1_0516F.1_g170520 Hydrangea macrophylla HOM05D007162 ORTHO05D007631 4.9e-41 171.4 126 62.7
PGR031G2441 Punica granatum HOM05D007162 ORTHO05D007631 4.9e-41 171.4 125 64.0
QL06p013113 Quercus lobata HOM05D007162 ORTHO05D007631 4.9e-41 171.4 123 64.2
CANSAT78G1184 Cannabis sativa HOM05D007162 ORTHO05D007631 6.4e-41 171.0 126 66.7
Ca_00957_v3 Cicer arietinum L. HOM05D007162 ORTHO05D007631 1.4e-40 169.9 125 64.8
Lj6P694T44 Lonicera japonica HOM05D007162 ORTHO05D007631 1.4e-40 169.9 125 61.6
Potri.010G149000 Populus trichocarpa HOM05D007162 ORTHO05D007631 4.2e-40 168.3 125 64.0
Eucgr.B03982 Eucalyptus grandis HOM05D007162 ORTHO05D007631 7.1e-40 167.5 125 60.8
BolC2t11828H Brassica oleracea HOM05D007162 ORTHO05D007631 1.2e-39 166.8 123 62.6
Carub.0008s0947 Capsella rubella HOM05D007162 ORTHO05D007631 1.2e-39 166.8 124 63.7
TPR.G33885 Trifolium pratense HOM05D007162 ORTHO05D007631 1.2e-39 166.8 123 64.2
Lj6g0014268 Lotus japonicus HOM05D007162 ORTHO05D007631 1.6e-39 166.4 125 60.8
Medtr2g033410 Medicago truncatula HOM05D007162 ORTHO05D007631 1.6e-39 166.4 123 65.0
BcaC03g17742 Brassica carinata HOM05D007162 ORTHO05D007631 2.1e-39 166.0 123 62.6
C02p57550 Brassica napus HOM05D007162 ORTHO05D007631 2.1e-39 166.0 123 62.6
Lalb_Chr15g0089091 Lupinus albus HOM05D007162 ORTHO05D007631 2.1e-39 166.0 125 62.4
AL8G23420 Arabidopsis lyrata HOM05D007162 ORTHO05D007631 2.7e-39 165.6 124 62.9
Phvul.006G120400 Phaseolus vulgaris HOM05D007162 ORTHO05D007631 2.7e-39 165.6 122 62.3
VMungo0540G1379 Vigna mungo HOM05D007162 ORTHO05D007631 2.7e-39 165.6 122 62.3
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 3.5e-39 165.2 126 65.9
Migut.G00033 Erythranthe guttata HOM05D007162 ORTHO05D007631 3.5e-39 165.2 126 65.9
DCAR_023374 Daucus carota HOM05D007162 ORTHO05D007631 6.0e-39 164.5 125 59.2
Sabra10G0115000 Salix brachista HOM05D007162 ORTHO05D007631 6.0e-39 164.5 125 63.2
Haze_00858 Corylus avellana HOM05D007162 ORTHO05D007631 7.8e-39 164.1 118 66.9
Lalb_Chr18g0058531 Lupinus albus HOM05D007162 ORTHO05D007631 7.8e-39 164.1 123 62.6
Thhalv10004464m.g Eutrema salsugineum HOM05D007162 ORTHO05D007631 1.0e-38 163.7 124 62.1
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 1.7e-38 162.9 125 61.6
Nn4g25520 Nelumbo nucifera HOM05D007162 ORTHO05D007631 3.0e-38 162.2 125 59.2
Psat1g162520 Pisum sativum HOM05D007162 ORTHO05D007631 3.0e-38 162.2 123 61.0
Sp2g19920 Schrenkiella parvula HOM05D007162 ORTHO05D007631 3.0e-38 162.2 124 61.3
BraA02t08804Z Brassica rapa HOM05D007162 ORTHO05D007631 3.9e-38 161.8 125 60.8
Lalb_Chr20g0120651 Lupinus albus HOM05D007162 ORTHO05D007631 3.9e-38 161.8 125 58.4
AT5G49610 Arabidopsis thaliana HOM05D007162 ORTHO05D007631 5.1e-38 161.4 125 61.6
Ciclev10005014m.g Citrus clementina HOM05D007162 ORTHO05D007631 5.1e-38 161.4 124 62.9
A02p38240 Brassica napus HOM05D007162 ORTHO05D007631 1.1e-37 160.2 125 59.2
HanXRQChr11g0353911 Helianthus annuus HOM05D007162 ORTHO05D007631 1.5e-37 159.8 122 62.3
Aa31LG11G8430 Aethionema arabicum HOM05D007162 ORTHO05D007631 3.3e-37 158.7 123 59.3
BcaB07g34165 Brassica carinata HOM05D007162 ORTHO05D007631 4.3e-37 158.3 119 62.2
CSS0000127 Camellia sinensis var. sinensis HOM05D007162 ORTHO05D007631 2.8e-36 155.6 105 68.6
CSS0043507 Camellia sinensis var. sinensis HOM05D007162 ORTHO05D007631 2.8e-36 155.6 105 68.6
GSVIVG01034950001 Vitis vinifera HOM05D007162 ORTHO05D007631 1.8e-35 152.9 111 62.2
PSO170G0624 Papaver somniferum HOM05D007162 ORTHO05D007631 2.4e-35 152.5 125 57.6
Aqoxy2G02919 Aquilegia oxysepala HOM05D007162 ORTHO05D007631 9.9e-34 147.1 125 55.2
MBI19_g03280_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 1.4e-32 143.3 123 55.3
HPP92_017256 Vanilla planifolia HOM05D007162 ORTHO05D007631 1.1e-29 133.7 124 51.6
ATR0693G387 Amborella trichopoda HOM05D007162 ORTHO05D007631 4.5e-26 121.7 122 45.9
Oeu004105.1 Olea europaea HOM05D007162 ORTHO05D007631 1.9e-24 116.3 127 48.0
Cc03_g00510 Coffea canephora HOM05D007162 ORTHO05D007631 1.0e-09 67.4 41 68.3
FAN22G0060 Fragaria x ananassa HOM05D000007 ORTHO05D009073 2.9e-09 65.9 80 38.8
FvH4_1g08170 Fragaria vesca HOM05D003814 ORTHO05D004399 4.2e-08 62.0 127 29.9
FAN19G0873 Fragaria x ananassa HOM05D003814 ORTHO05D004399 4.2e-08 62.0 127 29.9
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 7.2e-08 61.2 90 34.4
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 1.2e-07 60.5 128 25.8
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.2e-07 60.5 90 34.4
Ah.07g201630 Amaranthus hybridus HOM05D007162 ORTHO05D007631 2.1e-07 59.7 74 40.5
Dinv15135 Davidia involucrata HOM05D007162 ORTHO05D007631 2.1e-07 59.7 37 67.6
DCAR_022308 Daucus carota HOM05D000007 ORTHO05D000521 3.6e-07 58.9 124 29.0
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 6.1e-07 58.2 83 38.6
Cc05_g06390 Coffea canephora HOM05D000007 ORTHO05D000039 1.0e-06 57.4 138 25.4
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 1.0e-06 57.4 84 32.1
SalBow7G4817 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.0e-06 57.4 97 34.0
TAR178G0001 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.3e-06 57.0 86 32.6
TAR624G1373 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.3e-06 57.0 86 32.6
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 1.8e-06 56.6 135 27.4
Nn4g25094 Nelumbo nucifera HOM05D002420 ORTHO05D002422 1.8e-06 56.6 85 36.5
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 3.9e-06 55.5 95 37.9
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 3.9e-06 55.5 121 25.6
TAR624G0077 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.9e-06 55.5 117 31.6
TAR624G1176 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.9e-06 55.5 117 31.6
TAR636G0432 Trochodendron aralioides HOM05D003814 ORTHO05D004399 5.1e-06 55.1 92 30.4
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 6.7e-06 54.7 86 34.9
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 8.7e-06 54.3 72 40.3


User provided reference genes

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