Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.6e-46 189.1 97 100.0
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.6e-46 189.1 97 100.0
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 7.3e-36 153.7 95 82.1
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 1.1e-34 149.8 89 86.5
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 9.3e-31 136.7 93 69.9
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.8e-29 132.5 98 68.4
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.8e-29 132.5 98 68.4
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 1.8e-29 132.5 95 69.5
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.3e-29 132.1 98 68.4
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 2.3e-29 132.1 88 75.0
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 3.9e-29 131.3 88 75.0
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.1e-29 131.0 88 73.9
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.7e-29 130.2 96 65.6
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.1e-28 129.8 95 64.2
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 1.9e-28 129.0 91 71.4
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 2.5e-28 128.6 95 65.3
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.5e-28 128.6 96 64.6
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 9.6e-28 126.7 88 68.2
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 1.6e-27 125.9 92 65.2
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 2.1e-27 125.6 96 62.5
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 2.1e-27 125.6 95 66.3
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.1e-27 125.6 90 66.7
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 2.1e-27 125.6 96 63.5
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.8e-27 125.2 97 63.9
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 2.8e-27 125.2 86 69.8
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 2.8e-27 125.2 90 66.7
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 2.8e-27 125.2 90 66.7
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 3.7e-27 124.8 82 74.4
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.2e-27 124.0 94 63.8
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.2e-27 124.0 94 63.8
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.1e-26 123.2 82 73.2
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.1e-26 123.2 94 61.7
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 1.1e-26 123.2 84 73.8
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.4e-26 122.9 84 71.4
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 2.4e-26 122.1 84 72.6
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 2.4e-26 122.1 88 68.2
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 2.4e-26 122.1 93 63.4
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 3.1e-26 121.7 84 71.4
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 3.1e-26 121.7 94 64.9
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 4.0e-26 121.3 88 67.0
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 5.3e-26 120.9 84 69.0
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 5.3e-26 120.9 84 69.0
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 6.9e-26 120.6 94 62.8
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 6.9e-26 120.6 84 70.2
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 6.9e-26 120.6 93 66.7
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 9.0e-26 120.2 97 62.9
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 1.2e-25 119.8 94 63.8
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.5e-25 119.4 82 73.2
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 1.5e-25 119.4 96 65.6
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.0e-25 119.0 84 70.2
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 2.0e-25 119.0 91 62.6
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.6e-25 118.6 87 69.0
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.6e-25 118.6 86 65.1
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 3.4e-25 118.2 88 65.9
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 3.4e-25 118.2 88 65.9
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 3.4e-25 118.2 88 63.6
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 4.5e-25 117.9 88 64.8
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 4.5e-25 117.9 88 64.8
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 5.8e-25 117.5 97 63.9
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 5.8e-25 117.5 84 69.0
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 5.8e-25 117.5 94 59.6
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 9.9e-25 116.7 92 63.0
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 9.9e-25 116.7 94 60.6
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 9.9e-25 116.7 79 72.2
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 1.3e-24 116.3 85 68.2
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 1.3e-24 116.3 85 68.2
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.3e-24 116.3 97 62.9
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.3e-24 116.3 94 60.6
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.3e-24 116.3 85 65.9
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.3e-24 116.3 92 59.8
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 1.7e-24 115.9 85 67.1
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 1.7e-24 115.9 94 57.4
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 2.2e-24 115.5 88 63.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 2.2e-24 115.5 88 64.8
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 2.2e-24 115.5 88 61.4
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 2.9e-24 115.2 85 67.1
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 2.9e-24 115.2 88 63.6
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 3.8e-24 114.8 88 63.6
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 4.9e-24 114.4 88 62.5
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 4.9e-24 114.4 84 67.9
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 6.4e-24 114.0 83 68.7
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 8.4e-24 113.6 94 59.6
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 8.4e-24 113.6 88 60.2
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.4e-23 112.8 94 60.6
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 1.9e-23 112.5 79 72.2
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.9e-23 112.5 79 72.2
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 2.4e-23 112.1 88 64.8
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 3.2e-23 111.7 81 65.4
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 9.3e-23 110.2 84 64.3
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 1.6e-22 109.4 82 63.4
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 3.5e-22 108.2 75 68.0
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 7.9e-22 107.1 90 58.9
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.0e-21 106.7 87 58.6
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 2.3e-21 105.5 76 67.1
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 3.9e-21 104.8 77 64.9
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.1e-20 103.2 78 64.1
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.5e-20 102.8 72 69.4
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 2.5e-20 102.1 66 77.3
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 4.3e-20 101.3 77 62.3
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 2.1e-19 99.0 85 56.5
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 4.8e-19 97.8 69 68.1
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.8e-18 95.9 87 54.0
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 9.0e-18 93.6 73 63.0
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.0e-16 90.1 68 63.2
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-16 89.4 72 59.7
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 2.9e-16 88.6 80 55.0
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 7.1e-15 84.0 77 54.5
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-14 83.2 86 51.2
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 1.8e-13 79.3 63 61.9
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 1.9e-07 59.3 82 37.8
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 5.5e-07 57.8 46 60.9


User provided reference genes

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