Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 9.9e-36 152.9 77 100.0
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 6.0e-33 143.7 77 94.8
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 2.4e-21 105.1 75 72.0
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 2.6e-20 101.7 78 67.9
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 3.4e-20 101.3 83 69.9
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 4.5e-20 100.9 77 68.8
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 5.9e-20 100.5 77 66.2
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 7.6e-20 100.1 79 68.4
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 7.6e-20 100.1 77 67.5
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 1.3e-19 99.4 77 66.2
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 1.7e-19 99.0 77 66.2
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 2.9e-19 98.2 77 64.9
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 3.8e-19 97.8 70 70.0
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 3.8e-19 97.8 77 67.5
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 3.8e-19 97.8 77 63.6
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 3.8e-19 97.8 77 63.6
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 3.8e-19 97.8 75 68.0
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 6.5e-19 97.1 77 64.9
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 8.5e-19 96.7 77 66.2
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 8.5e-19 96.7 77 66.2
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.1e-18 96.3 77 64.9
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 1.4e-18 95.9 75 66.7
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 2.5e-18 95.1 79 65.8
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 3.2e-18 94.7 59 79.7
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 5.5e-18 94.0 75 65.3
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 5.5e-18 94.0 77 64.9
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 7.2e-18 93.6 77 62.3
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 7.2e-18 93.6 81 63.0
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 9.3e-18 93.2 81 60.5
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 9.3e-18 93.2 78 64.1
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 1.2e-17 92.8 83 59.0
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 1.6e-17 92.4 78 61.5
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 1.6e-17 92.4 79 65.8
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 1.6e-17 92.4 78 62.8
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 2.7e-17 91.7 83 56.6
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 2.7e-17 91.7 80 61.2
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 2.7e-17 91.7 81 60.5
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 3.6e-17 91.3 81 61.7
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 3.6e-17 91.3 81 61.7
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 4.6e-17 90.9 70 67.1
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 4.6e-17 90.9 54 81.5
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 4.6e-17 90.9 82 57.3
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 4.6e-17 90.9 75 61.3
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 4.6e-17 90.9 74 66.2
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 6.1e-17 90.5 73 63.0
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 6.1e-17 90.5 61 75.4
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 6.1e-17 90.5 79 60.8
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 6.1e-17 90.5 77 58.4
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 7.9e-17 90.1 61 72.1
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 7.9e-17 90.1 61 70.5
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 1.0e-16 89.7 78 59.0
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 1.0e-16 89.7 61 67.2
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 1.3e-16 89.4 77 58.4
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 1.8e-16 89.0 73 57.5
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 1.8e-16 89.0 83 60.2
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 2.3e-16 88.6 73 61.6
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 2.3e-16 88.6 77 59.7
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 3.0e-16 88.2 73 58.9
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 3.0e-16 88.2 73 58.9
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 3.0e-16 88.2 73 58.9
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 3.0e-16 88.2 77 59.7
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 3.0e-16 88.2 78 61.5
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 3.9e-16 87.8 58 72.4
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 6.7e-16 87.0 78 60.3
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 8.7e-16 86.7 74 58.1
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 8.7e-16 86.7 81 59.3
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 1.1e-15 86.3 46 93.5
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 1.1e-15 86.3 53 79.2
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 1.1e-15 86.3 77 55.8
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 1.9e-15 85.5 71 57.7
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 1.9e-15 85.5 72 58.3
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 2.5e-15 85.1 73 57.5
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 2.5e-15 85.1 54 74.1
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 4.3e-15 84.3 80 60.0
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 7.4e-15 83.6 71 56.3
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 7.4e-15 83.6 74 59.5
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 9.7e-15 83.2 54 72.2
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 1.3e-14 82.8 73 57.5
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 1.6e-14 82.4 71 62.0
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 8.2e-14 80.1 56 69.6
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 3.1e-13 78.2 55 67.3
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 3.1e-13 78.2 59 62.7
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 1.5e-12 75.9 84 50.0
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 2.0e-12 75.5 64 57.8
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 2.6e-12 75.1 55 63.6
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 1.3e-11 72.8 66 54.5
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 1.7e-11 72.4 58 62.1
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 1.7e-11 72.4 122 41.0
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 9.4e-10 66.6 116 39.7
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 6.7e-08 60.5 40 75.0
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 7.4e-07 57.0 36 75.0


User provided reference genes

Program Settings