Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022070 Chenopodium quinoa HOM05D020966 ORTHO05D023391 0.0e+00 2332.4 1194 100.0
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 0.0e+00 2115.1 1103 96.1
EL10Ac2g03892 Beta vulgaris HOM05D020966 ORTHO05D023391 0.0e+00 1617.4 1119 75.1
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 0.0e+00 1375.5 1122 64.8
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 1.2e-34 153.3 559 25.2
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 2.5e-29 135.6 525 25.1
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.0e-25 123.6 511 26.4
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 1.0e-25 123.6 592 24.5
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 1.3e-25 123.2 641 25.1
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 1.7e-25 122.9 387 27.4
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 1.1e-24 120.2 661 25.3
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 1.4e-24 119.8 661 25.3
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 2.5e-24 119.0 452 26.8
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 6.3e-20 104.4 454 26.7
Cc00_g19240 Coffea canephora HOM05D009149 ORTHO05D003639 2.4e-19 102.4 575 23.7
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 1.2e-18 100.1 642 22.4
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 5.9e-18 97.8 619 24.9
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 1.3e-17 96.7 615 23.7
AUR62018085 Chenopodium quinoa HOM05D002168 ORTHO05D002277 2.2e-17 95.9 53 92.5
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.9e-17 95.5 601 22.6
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.0e-14 87.0 450 26.2
EL10Ac9g22437 Beta vulgaris HOM05D020966 ORTHO05D023391 1.8e-14 86.3 169 33.1
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.0e-14 85.5 448 24.6
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.9e-14 85.1 684 22.2
CSS0044889 Camellia sinensis var. sinensis HOM05D008778 ORTHO05D003639 1.5e-13 83.2 329 27.7
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 3.7e-12 78.6 373 25.5
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.0e-11 74.3 84 45.2
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 8.5e-09 67.4 448 25.0
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.5e-09 67.4 85 45.9
FvH4_1g29795 Fragaria vesca HOM05D009149 ORTHO05D003639 1.1e-08 67.0 293 23.9
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-08 66.6 89 44.9
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-08 65.9 95 43.2
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-08 65.5 85 41.2
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-08 64.7 103 39.8
Rhsim06G0215800 Rhododendron simsii HOM05D001371 ORTHO05D001319 7.2e-08 64.3 421 24.9
CARHR031460 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.6e-07 63.2 409 24.2
Rhsim06G0217900 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.1e-07 62.8 266 27.4
RcHm_v2.0_Chr5g0076791 Rosa chinensis HOM05D025191 ORTHO05D026112 2.1e-07 62.8 589 22.8
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-07 62.8 93 39.8
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-07 62.0 68 45.6
Sed0015741 Sechium edule HOM05D001371 ORTHO05D001319 1.0e-06 60.5 256 24.6
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-06 60.1 67 47.8
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-06 60.1 72 44.4
COL.COLO4_09640 Corchorus olitorius HOM05D001371 ORTHO05D001319 2.3e-06 59.3 246 25.2
Duzib213G0305 Durio zibethinus HOM05D001371 ORTHO05D001319 3.0e-06 58.9 228 26.3
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-06 58.9 110 35.5
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-06 58.5 60 46.7
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-06 58.5 92 38.0
CSS0017117 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 8.8e-06 57.4 374 23.5


User provided reference genes

Program Settings