Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.8e-85 317.8 160 100.0
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.8e-46 188.0 249 49.8
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.7e-35 152.5 178 52.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.7e-34 149.8 254 41.7
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 7.1e-28 127.9 205 42.0
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 9.3e-28 127.5 253 38.3
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.1e-27 126.3 259 36.3
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 6.0e-27 124.8 246 36.6
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.0e-26 122.5 254 36.2
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.9e-26 122.1 67 91.0
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.6e-24 116.7 247 34.0
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 4.8e-24 115.2 247 35.6
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 4.8e-24 115.2 251 34.3
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 8.1e-24 114.4 259 35.1
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.1e-23 114.0 253 36.0
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 2.4e-23 112.8 275 34.2
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.0e-23 112.1 248 35.9
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 6.9e-23 111.3 258 34.1
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.2e-22 110.5 248 35.5
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.4e-22 109.0 252 32.1
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 4.5e-22 108.6 258 34.1
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 4.5e-22 108.6 252 33.3
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.5e-22 108.6 249 32.5
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 5.8e-22 108.2 258 33.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 7.6e-22 107.8 257 33.9
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.2e-21 106.3 252 32.5
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 2.2e-21 106.3 252 34.1
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.9e-21 105.9 245 34.7
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 3.8e-21 105.5 246 33.7
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 6.4e-21 104.8 182 37.9
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.4e-21 104.4 192 36.5
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.1e-20 104.0 266 32.0
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.4e-20 103.6 190 37.4
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 4.2e-20 102.1 251 32.3
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 4.2e-20 102.1 254 32.3
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 4.2e-20 102.1 244 32.0
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 7.1e-20 101.3 253 32.8
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 9.3e-20 100.9 245 31.8
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 9.3e-20 100.9 245 31.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.6e-19 100.1 248 32.3
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.6e-19 100.1 245 33.1
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 2.1e-19 99.8 253 32.4
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.1e-19 99.8 198 34.3
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 2.1e-19 99.8 246 32.9
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 1.0e-18 97.4 244 30.7
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.0e-18 97.4 244 30.7
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.0e-18 97.4 244 30.7
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.0e-18 97.4 244 30.7
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.0e-18 97.4 250 30.8
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.0e-18 97.4 196 34.2
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.8e-18 96.7 237 32.5
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.0e-18 95.9 116 55.2
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 6.7e-18 94.7 242 31.0
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 6.7e-18 94.7 230 33.5
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 8.7e-18 94.4 261 30.7
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.5e-17 93.6 257 32.7
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 3.3e-17 92.4 261 30.3
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.3e-17 92.4 255 33.3
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 3.3e-17 92.4 247 30.0
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 3.3e-17 92.4 254 32.3
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 4.3e-17 92.0 257 33.1
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 4.3e-17 92.0 248 31.0
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 5.6e-17 91.7 248 32.3
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 7.4e-17 91.3 257 29.6
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 9.6e-17 90.9 257 30.0
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.6e-16 90.1 66 65.2
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 2.1e-16 89.7 256 30.9
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 3.7e-16 89.0 61 67.2
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.7e-16 89.0 260 29.6
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 4.8e-16 88.6 67 65.7
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 4.8e-16 88.6 244 29.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.8e-16 88.6 67 64.2
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 4.8e-16 88.6 251 28.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 4.8e-16 88.6 254 29.1
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 4.8e-16 88.6 67 62.7
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 8.2e-16 87.8 252 29.8
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 3.1e-15 85.9 67 64.2
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 3.1e-15 85.9 67 61.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.1e-15 85.9 67 61.2
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 5.3e-15 85.1 80 56.2
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 1.2e-14 84.0 67 59.7
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.5e-14 83.6 233 30.9
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 2.0e-14 83.2 176 33.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.0e-14 83.2 251 30.7
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.0e-14 83.2 67 59.7
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.6e-14 82.8 67 61.2
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.6e-14 82.8 67 62.7
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.6e-14 82.8 67 62.7
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.6e-14 82.8 251 30.7
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.5e-14 82.0 67 58.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 4.5e-14 82.0 67 62.7
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 5.8e-14 81.6 59 66.1
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 7.6e-14 81.3 67 58.2
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.6e-14 81.3 251 30.3
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.0e-13 80.9 67 59.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 1.3e-13 80.5 69 60.9
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.3e-13 80.5 63 58.7
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.7e-13 80.1 66 56.1
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 2.2e-13 79.7 66 57.6
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.9e-13 79.3 64 62.5
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 2.9e-13 79.3 67 59.7
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 8.4e-13 77.8 62 61.3
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 8.4e-13 77.8 67 53.7
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.4e-12 77.0 67 56.7
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 7.1e-12 74.7 67 55.2
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 3.5e-11 72.4 67 52.2
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 8.7e-10 67.8 64 54.7
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 8.7e-10 67.8 65 53.8
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.5e-09 66.2 67 49.3
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 3.3e-09 65.9 225 27.6
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.2e-08 63.2 103 39.8
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.2e-08 61.2 103 38.8
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.9e-07 58.2 92 47.8
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.5e-06 57.0 51 51.0
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.4e-06 55.8 182 26.9
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.9e-06 55.1 41 65.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.0e-05 54.3 41 61.0


User provided reference genes

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