Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.0e-173 613.2 292 100.0
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 5.1e-157 557.8 272 98.2
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 7.4e-132 474.2 271 83.4
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 4.6e-118 428.3 271 75.3
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 6.7e-109 397.9 272 68.0
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 1.7e-107 393.3 272 67.6
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 2.8e-107 392.5 272 66.9
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 1.8e-106 389.8 268 67.9
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 2.4e-106 389.4 272 66.2
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 4.1e-106 388.7 272 65.4
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 7.0e-106 387.9 272 65.4
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 2.0e-105 386.3 272 65.4
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 2.6e-105 386.0 271 66.4
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 2.6e-105 386.0 271 66.4
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 4.5e-105 385.2 272 64.3
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 4.5e-105 385.2 272 64.3
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 1.0e-104 384.0 272 66.2
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.7e-104 383.3 272 65.4
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 2.2e-104 382.9 272 64.7
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 3.8e-104 382.1 272 64.3
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 6.5e-104 381.3 272 64.7
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 2.5e-103 379.4 269 66.2
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 2.5e-103 379.4 272 64.7
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 3.2e-103 379.0 256 68.4
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 3.6e-102 375.6 272 65.1
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 1.0e-101 374.0 273 65.2
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 2.3e-101 372.9 279 62.4
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 3.0e-101 372.5 273 65.6
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 3.3e-100 369.0 272 63.6
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 5.7e-100 368.2 273 63.7
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 9.7e-100 367.5 272 62.5
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.7e-99 366.7 273 63.0
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 2.2e-99 366.3 274 63.5
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 2.2e-99 366.3 272 62.9
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 6.3e-99 364.8 273 63.0
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 8.2e-99 364.4 272 61.8
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 1.1e-98 364.0 275 61.8
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.8e-98 363.2 272 62.1
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 2.4e-98 362.8 271 63.1
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 7.0e-98 361.3 273 63.7
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 1.6e-97 360.1 275 61.5
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 1.0e-96 357.5 269 62.1
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.0e-96 357.5 273 63.7
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 1.1e-95 354.0 275 61.5
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 7.2e-95 351.3 255 64.3
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 1.2e-94 350.5 270 61.1
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 6.1e-94 348.2 244 64.8
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 2.8e-91 339.3 264 61.0
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 1.1e-90 337.4 247 62.3
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 3.8e-88 328.9 270 55.9
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 2.5e-87 326.2 252 59.9
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 3.2e-87 325.9 253 60.1
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 1.2e-86 323.9 252 59.5
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.2e-86 323.9 252 59.5
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 3.6e-86 322.4 256 59.0
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 4.7e-86 322.0 252 59.1
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 8.0e-86 321.2 252 59.1
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.4e-85 320.5 252 59.1
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.4e-85 320.5 252 59.1
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 6.8e-85 318.2 231 62.8
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 2.6e-84 316.2 269 56.9
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 1.3e-83 313.9 243 62.1
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 1.7e-83 313.5 224 65.6
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 4.1e-82 308.9 268 57.8
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 7.0e-82 308.1 265 55.5
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.5e-79 299.7 272 52.2
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.3e-77 293.1 262 52.7
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 3.0e-77 292.7 239 58.6
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 4.0e-77 292.4 254 54.3
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 6.8e-53 211.8 252 44.0
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 5.4e-50 202.2 259 43.2
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 1.7e-48 197.2 170 57.1
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 8.6e-48 194.9 169 57.4
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 7.1e-42 175.3 252 39.7
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 6.6e-40 168.7 137 62.8
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.2e-33 147.9 260 33.8
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 6.7e-24 115.5 129 46.5
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 2.2e-19 100.5 149 38.3


User provided reference genes

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