Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021962 Chenopodium quinoa HOM05D000095 ORTHO05D138212 1.6e-85 319.3 153 100.0
AUR62021960 Chenopodium quinoa HOM05D000095 ORTHO05D000330 2.0e-35 152.9 114 65.8
AUR62012691 Chenopodium quinoa HOM05D000095 ORTHO05D000330 1.4e-17 93.6 60 75.0
AUR62012698 Chenopodium quinoa HOM05D000095 ORTHO05D000330 7.8e-16 87.8 75 57.3
Manes.18G023500 Manihot esculenta HOM05D000095 ORTHO05D000534 3.0e-07 59.3 77 40.3
Ah.02g125130 Amaranthus hybridus HOM05D000095 ORTHO05D000534 5.1e-07 58.5 73 43.8
EL10Ac2g03749 Beta vulgaris HOM05D000095 ORTHO05D026997 8.6e-07 57.8 72 43.1
Manes.01G136200 Manihot esculenta HOM05D000095 ORTHO05D000534 1.1e-06 57.4 77 40.3
Potri.005G228000 Populus trichocarpa HOM05D000095 ORTHO05D000534 1.1e-06 57.4 70 41.4
Lsat_1_v5_gn_3_76680 Lactuca sativa HOM05D000095 ORTHO05D000534 1.5e-06 57.0 77 40.3
HanXRQChr07g0192881 Helianthus annuus HOM05D000095 ORTHO05D000534 1.9e-06 56.6 79 40.5
Oeu049940.1 Olea europaea HOM05D000095 ORTHO05D000534 1.9e-06 56.6 62 41.9
Ciclev10029669m.g Citrus clementina HOM05D000095 ORTHO05D000534 2.5e-06 56.2 62 45.2
Nitab4.5_0001091g0100 Nicotiana tabacum HOM05D000095 ORTHO05D000534 2.5e-06 56.2 63 38.1
Actinidia24322 Actinidia chinensis HOM05D000095 ORTHO05D000534 3.3e-06 55.8 79 38.0
MELO3C023292.2 Cucumis melo HOM05D000095 ORTHO05D000534 3.3e-06 55.8 73 38.4
Nitab4.5_0028143g0010 Nicotiana tabacum HOM05D000095 ORTHO05D000534 3.3e-06 55.8 62 40.3
Oeu029845.1 Olea europaea HOM05D000095 ORTHO05D000534 3.3e-06 55.8 62 41.9
EL10Ac8g20041 Beta vulgaris HOM05D000095 ORTHO05D026997 4.3e-06 55.5 89 33.7
FvH4_1g13110 Fragaria vesca HOM05D000095 ORTHO05D000534 4.3e-06 55.5 80 37.5
FvH4_2g08980 Fragaria vesca HOM05D000095 ORTHO05D000534 4.3e-06 55.5 63 41.3
FAN23G2838 Fragaria x ananassa HOM05D000095 ORTHO05D000534 4.3e-06 55.5 80 37.5
FAN26G2017 Fragaria x ananassa HOM05D000095 ORTHO05D000534 4.3e-06 55.5 80 37.5
FAN28G2785 Fragaria x ananassa HOM05D000095 ORTHO05D000534 4.3e-06 55.5 80 37.5
Gohir.A11G043400 Gossypium hirsutum HOM05D000095 ORTHO05D000534 4.3e-06 55.5 78 38.5
Gohir.D11G046900 Gossypium hirsutum HOM05D000095 ORTHO05D000534 4.3e-06 55.5 78 38.5
Gorai.007G050400 Gossypium raimondii HOM05D000095 ORTHO05D000534 4.3e-06 55.5 78 38.5
MD02G1145800 Malus domestica HOM05D000095 ORTHO05D000534 4.3e-06 55.5 77 37.7
RcHm_v2.0_Chr2g0101281 Rosa chinensis HOM05D000095 ORTHO05D000534 4.3e-06 55.5 80 37.5
RcHm_v2.0_Chr6g0264661 Rosa chinensis HOM05D000095 ORTHO05D000534 4.3e-06 55.5 62 41.9
Sabra05G0175900 Salix brachista HOM05D000095 ORTHO05D000534 4.3e-06 55.5 70 42.9
TWI79G0298 Tripterygium wilfordii HOM05D000095 ORTHO05D000534 4.3e-06 55.5 70 40.0
FAN27G0338 Fragaria x ananassa HOM05D000095 ORTHO05D000534 5.6e-06 55.1 85 37.6
MD15G1260000 Malus domestica HOM05D000095 ORTHO05D000534 5.6e-06 55.1 77 37.7
Manes.05G158300 Manihot esculenta HOM05D000095 ORTHO05D000534 5.6e-06 55.1 105 32.4
TAR628G0574 Trochodendron aralioides HOM05D000095 ORTHO05D000534 5.6e-06 55.1 73 41.1
vmacro17488 Vaccinium macrocarpon HOM05D000095 ORTHO05D000534 5.6e-06 55.1 71 45.1
CsaV3_2G014710 Cucumis sativus L. HOM05D000095 ORTHO05D000534 7.3e-06 54.7 69 39.1
FAN24G0259 Fragaria x ananassa HOM05D000095 ORTHO05D000534 7.3e-06 54.7 62 41.9
FAN27G1897 Fragaria x ananassa HOM05D000095 ORTHO05D000534 7.3e-06 54.7 62 41.9
Gohir.D03G014350 Gossypium hirsutum HOM05D000095 ORTHO05D000534 7.3e-06 54.7 76 42.1
Prupe.7G156100 Prunus persica HOM05D000095 ORTHO05D000534 7.3e-06 54.7 77 37.7
QL11p044085 Quercus lobata HOM05D000095 ORTHO05D000534 7.3e-06 54.7 67 40.3
QL11p044769 Quercus lobata HOM05D000095 ORTHO05D000534 7.3e-06 54.7 67 40.3
AUR62004064 Chenopodium quinoa HOM05D000095 ORTHO05D000534 9.6e-06 54.3 71 43.7
AUR62007577 Chenopodium quinoa HOM05D012707 ORTHO05D013844 9.6e-06 54.3 71 43.7
Gorai.009G201700 Gossypium raimondii HOM05D000095 ORTHO05D047083 9.6e-06 54.3 77 39.0


User provided reference genes

Program Settings