Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 2.1e-94 349.0 170 100.0
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 3.0e-69 265.4 170 79.4
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 2.7e-57 225.7 171 67.3
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.8e-45 186.4 170 60.0
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 5.2e-45 184.9 170 58.2
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 8.9e-45 184.1 170 58.2
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 2.0e-44 183.0 174 58.0
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.7e-43 179.9 141 63.1
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.1e-42 177.2 186 54.3
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 1.4e-42 176.8 166 57.2
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 4.1e-42 175.3 167 56.3
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 5.4e-42 174.9 184 55.4
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 1.2e-41 173.7 168 58.3
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 1.6e-41 173.3 171 56.1
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 1.6e-41 173.3 170 53.5
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 2.0e-41 172.9 170 56.5
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.5e-41 172.2 169 56.2
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 1.0e-40 170.6 133 66.2
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 1.0e-40 170.6 169 55.6
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 1.3e-40 170.2 172 54.1
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 1.7e-40 169.9 159 57.9
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 3.0e-40 169.1 172 57.6
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 3.9e-40 168.7 157 55.4
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 3.9e-40 168.7 157 55.4
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 3.9e-40 168.7 167 56.9
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 6.6e-40 167.9 165 57.6
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.1e-39 167.2 173 51.4
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 2.5e-39 166.0 175 54.9
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 4.3e-39 165.2 164 56.1
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 7.3e-39 164.5 175 54.3
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 1.6e-38 163.3 172 51.7
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 1.6e-38 163.3 166 52.4
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.1e-38 162.9 176 52.3
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 2.8e-38 162.5 171 52.0
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 2.8e-38 162.5 170 54.7
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 3.6e-38 162.2 175 54.9
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 1.1e-37 160.6 162 56.2
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 1.1e-37 160.6 143 57.3
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 1.8e-37 159.8 155 54.2
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 1.8e-37 159.8 176 52.8
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 1.8e-37 159.8 230 45.2
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.3e-37 159.5 172 54.7
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.3e-37 159.5 206 49.0
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 4.0e-37 158.7 169 52.7
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 4.0e-37 158.7 143 58.0
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 8.9e-37 157.5 154 54.5
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 2.0e-36 156.4 199 48.7
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 4.4e-36 155.2 125 63.2
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 4.4e-36 155.2 174 48.9
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 4.4e-36 155.2 172 48.8
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 2.2e-35 152.9 145 54.5
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 4.9e-35 151.8 171 52.6
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 1.1e-34 150.6 173 52.0
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 1.4e-34 150.2 124 62.9
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 1.4e-34 150.2 91 78.0
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 3.2e-34 149.1 171 52.0
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 4.1e-34 148.7 121 62.0
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 9.2e-34 147.5 172 51.2
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 9.2e-34 147.5 172 51.2
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 9.2e-34 147.5 141 55.3
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.2e-33 147.1 174 51.7
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 1.6e-33 146.7 173 50.3
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 2.1e-33 146.4 90 76.7
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 2.7e-33 146.0 160 52.5
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 2.7e-33 146.0 172 50.6
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 2.7e-33 146.0 172 50.6
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.7e-33 146.0 172 51.7
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 3.5e-33 145.6 172 50.6
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 4.6e-33 145.2 83 84.3
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 6.0e-33 144.8 161 51.6
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 1.7e-32 143.3 164 51.2
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 1.7e-32 143.3 155 54.8
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 3.9e-32 142.1 172 50.0
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 5.1e-32 141.7 124 58.9
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 6.6e-32 141.4 170 49.4
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 2.5e-31 139.4 161 50.3
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 7.3e-31 137.9 135 52.6
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.2e-30 137.1 128 57.8
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 1.4e-29 133.7 125 56.8
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.0e-29 132.1 126 57.1
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 7.6e-28 127.9 85 72.9
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.7e-25 119.4 90 61.1
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 2.7e-25 119.4 93 57.0
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.7e-24 116.7 121 51.2
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.1e-23 114.0 125 49.6
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 6.2e-22 108.2 137 46.0
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 2.4e-21 106.3 89 62.9
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 4.2e-18 95.5 121 46.3
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 1.3e-16 90.5 168 36.9
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 2.3e-16 89.7 118 45.8
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 3.9e-16 89.0 131 42.7
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 9.6e-15 84.3 123 41.5
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 1.3e-14 84.0 49 79.6
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 2.1e-14 83.2 119 42.9
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 2.1e-14 83.2 70 64.3
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 1.2e-12 77.4 171 36.8
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 7.6e-12 74.7 43 79.1
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.7e-11 73.6 79 46.8
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.6e-09 67.0 89 42.7
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 1.6e-09 67.0 124 40.3
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 6.0e-09 65.1 39 74.4
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 6.7e-08 61.6 70 40.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 7.4e-07 58.2 89 34.8
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 9.6e-07 57.8 78 41.0


User provided reference genes

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