Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 3.7e-54 214.5 102 100.0
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 5.9e-28 127.5 101 59.4
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 1.0e-27 126.7 100 61.0
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.9e-27 125.2 102 53.9
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.9e-27 125.2 102 53.9
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 1.9e-26 122.5 93 61.3
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 9.5e-26 120.2 101 55.4
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.2e-25 119.8 88 59.1
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.6e-25 119.4 104 56.7
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 8.0e-25 117.1 90 54.4
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.0e-24 116.7 77 63.6
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.0e-24 116.7 100 50.0
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 1.8e-24 115.9 96 47.9
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 1.8e-24 115.9 96 47.9
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 3.0e-24 115.2 100 50.0
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 4.0e-24 114.8 102 49.0
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 6.8e-24 114.0 95 53.7
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 1.5e-23 112.8 89 56.2
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.0e-23 112.5 99 50.5
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 3.4e-23 111.7 93 52.7
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 5.7e-23 110.9 90 56.7
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.3e-22 109.8 114 45.6
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 1.7e-22 109.4 88 55.7
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 1.7e-22 109.4 106 48.1
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 2.2e-22 109.0 103 50.5
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 2.8e-22 108.6 100 53.0
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 3.7e-22 108.2 113 45.1
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 6.3e-22 107.5 101 52.5
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 8.3e-22 107.1 74 55.4
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.1e-21 106.7 97 55.7
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.0e-21 104.0 101 47.5
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 1.2e-20 103.2 97 45.4
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 4.5e-20 101.3 101 47.5
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 5.9e-20 100.9 70 55.7
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 5.9e-20 100.9 70 57.1
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 5.9e-20 100.9 91 52.7
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.8e-20 100.5 91 51.6
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.0e-19 100.1 70 55.7
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.3e-19 99.8 91 50.5
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.3e-19 99.8 91 50.5
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 2.9e-19 98.6 99 47.5
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 6.6e-19 97.4 91 49.5
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 8.6e-19 97.1 101 46.5
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.6e-17 92.8 89 49.4
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 1.6e-17 92.8 89 46.1
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.8e-17 92.0 101 46.5
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.8e-17 92.0 98 44.9
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 4.0e-16 88.2 85 47.1
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 1.2e-15 86.7 101 43.6
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.6e-15 85.5 71 53.5
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 7.5e-15 84.0 68 50.0
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 7.5e-15 84.0 63 54.0
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 1.7e-14 82.8 107 41.1
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 2.2e-14 82.4 56 58.9
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 3.7e-14 81.6 108 39.8
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 3.7e-14 81.6 107 39.3
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 3.7e-14 81.6 107 39.3
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 6.4e-14 80.9 104 38.5
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 1.1e-13 80.1 101 39.6
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.4e-13 79.7 100 39.0
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 3.2e-13 78.6 91 39.6
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 3.2e-13 78.6 66 50.0
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 4.1e-13 78.2 101 37.6
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 7.0e-13 77.4 79 44.3
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 9.2e-13 77.0 110 39.1
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 9.2e-13 77.0 110 39.1
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 9.2e-13 77.0 110 39.1
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 3.5e-12 75.1 110 38.2
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 3.5e-12 75.1 110 38.2
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 6.0e-12 74.3 101 38.6
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 6.0e-12 74.3 101 38.6
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 6.0e-12 74.3 101 38.6
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 2.3e-11 72.4 88 38.6
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 1.5e-10 69.7 105 37.1
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.6e-09 66.2 95 34.7
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 1.6e-09 66.2 95 34.7
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.6e-09 66.2 95 34.7
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 2.1e-09 65.9 93 39.8
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 2.1e-09 65.9 63 46.0
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 2.8e-09 65.5 95 34.7
EL10Ac5g11057 Beta vulgaris HOM05D021338 ORTHO05D009983 1.3e-06 56.6 57 52.6


User provided reference genes

Program Settings