Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 7.1e-83 310.8 191 100.0
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.9e-60 235.7 191 82.7
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 4.6e-58 228.4 197 78.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 7.6e-53 211.1 199 72.4
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 3.8e-52 208.8 201 70.6
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 1.4e-51 206.8 188 71.8
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.6e-50 203.4 180 75.0
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.6e-50 201.8 166 79.5
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 6.0e-50 201.4 192 69.8
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 6.0e-50 201.4 202 66.3
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 6.0e-50 201.4 195 69.7
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 6.0e-50 201.4 169 75.1
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 6.0e-50 201.4 169 75.1
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 7.9e-50 201.1 195 71.3
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 7.9e-50 201.1 195 71.3
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 1.0e-49 200.7 196 67.3
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.3e-49 200.3 169 74.6
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.8e-49 199.9 196 70.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 1.8e-49 199.9 172 76.7
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.8e-49 199.9 191 70.7
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 2.3e-49 199.5 172 73.3
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 3.0e-49 199.1 191 70.2
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 3.9e-49 198.7 175 74.3
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 3.9e-49 198.7 190 70.5
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.1e-48 197.2 173 73.4
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.1e-48 197.2 159 77.4
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 1.5e-48 196.8 148 84.5
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 1.9e-48 196.4 201 68.7
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.9e-48 196.4 195 69.7
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 2.5e-48 196.1 164 76.2
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 4.3e-48 195.3 169 76.3
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 5.7e-48 194.9 171 74.9
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 5.7e-48 194.9 195 65.6
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 7.4e-48 194.5 158 79.1
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 7.4e-48 194.5 159 78.6
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.4e-48 194.5 189 69.8
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 7.4e-48 194.5 178 70.8
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 9.6e-48 194.1 189 70.4
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 9.6e-48 194.1 154 81.2
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 9.6e-48 194.1 193 66.8
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.3e-47 193.7 158 78.5
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.3e-47 193.7 158 78.5
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 1.3e-47 193.7 158 78.5
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 1.3e-47 193.7 166 74.1
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-47 193.4 163 76.7
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-47 193.4 163 76.7
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.6e-47 193.4 174 74.1
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.6e-47 193.4 193 69.9
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 1.6e-47 193.4 185 71.4
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 2.1e-47 193.0 161 75.8
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 2.1e-47 193.0 166 75.3
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 2.8e-47 192.6 158 78.5
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 6.3e-47 191.4 157 78.3
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 6.3e-47 191.4 163 75.5
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 6.3e-47 191.4 191 68.6
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 6.3e-47 191.4 191 68.6
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 8.2e-47 191.0 180 70.0
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.1e-46 190.7 158 77.8
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.4e-46 190.3 169 73.4
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 2.4e-46 189.5 166 74.7
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 3.1e-46 189.1 169 72.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 3.1e-46 189.1 170 73.5
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.1e-46 188.7 166 74.7
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 4.1e-46 188.7 191 68.6
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 4.1e-46 188.7 166 74.1
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 5.3e-46 188.3 191 66.5
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 6.9e-46 188.0 194 64.4
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 6.9e-46 188.0 169 71.6
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.9e-46 188.0 166 74.1
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 6.9e-46 188.0 194 67.0
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.5e-45 186.8 173 72.3
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.6e-45 186.0 169 73.4
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.4e-45 185.7 180 68.3
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 4.5e-45 185.3 173 69.4
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.5e-45 185.3 166 72.9
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 4.5e-45 185.3 154 75.3
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 5.9e-45 184.9 156 76.3
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 5.9e-45 184.9 149 79.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 1.7e-44 183.3 196 64.8
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 2.2e-44 183.0 149 78.5
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 2.9e-44 182.6 194 64.9
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 2.9e-44 182.6 147 80.3
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 3.8e-44 182.2 178 69.1
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 3.8e-44 182.2 173 69.9
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 5.0e-44 181.8 175 69.7
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 8.5e-44 181.0 191 68.1
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.1e-43 180.6 191 64.9
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 1.1e-43 180.6 196 62.2
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 2.5e-43 179.5 156 73.1
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.2e-43 179.1 192 64.6
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 5.5e-43 178.3 161 73.9
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.2e-43 177.9 196 62.8
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 3.6e-42 175.6 191 65.4
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 4.6e-42 175.3 168 69.0
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 1.0e-41 174.1 202 63.4
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 5.1e-41 171.8 191 63.9
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.1e-40 170.6 166 68.1
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 1.5e-40 170.2 196 60.7
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 7.4e-40 167.9 194 61.3
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 1.6e-39 166.8 172 65.7
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 8.2e-39 164.5 132 81.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 3.1e-38 162.5 197 59.9
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 4.1e-38 162.2 191 61.3
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 7.7e-37 157.9 192 60.4
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 4.6e-34 148.7 168 59.5
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.5e-32 143.7 173 60.1
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.8e-31 139.4 158 60.8
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 7.7e-29 131.3 166 59.6
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 7.2e-27 124.8 170 55.9
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 2.7e-26 122.9 174 52.3
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.0e-25 120.9 105 62.9
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 2.0e-24 116.7 146 58.9
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 9.7e-24 114.4 184 51.6
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.7e-20 103.6 124 54.0
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 2.5e-19 99.8 60 76.7
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.6e-18 97.1 140 57.1
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 6.1e-18 95.1 118 62.7
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-16 90.5 110 55.5
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 2.8e-15 86.3 185 43.2
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 4.7e-10 68.9 119 47.1
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 4.4e-08 62.4 160 41.9


User provided reference genes

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