Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 4.2e-110 401.4 203 100.0
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 7.0e-97 357.5 186 95.7
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.2e-93 346.7 186 94.1
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 1.2e-88 330.1 186 87.6
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 5.4e-81 304.7 186 79.6
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 9.5e-78 293.9 186 76.3
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 1.6e-77 293.1 186 76.3
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 1.8e-76 289.7 186 76.3
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 8.9e-76 287.3 186 76.9
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 2.0e-75 286.2 186 76.9
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.3e-74 283.5 186 74.2
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.3e-74 283.5 186 74.2
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 1.3e-74 283.5 186 74.2
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 2.2e-74 282.7 183 77.0
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 6.4e-74 281.2 186 74.2
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 8.3e-74 280.8 186 74.7
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 1.1e-73 280.4 186 74.7
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 1.4e-73 280.0 186 74.2
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 1.9e-73 279.6 186 73.7
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.9e-73 279.6 186 76.3
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 2.4e-73 279.3 186 74.7
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 2.4e-73 279.3 179 76.5
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 2.4e-73 279.3 186 74.2
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 4.1e-73 278.5 186 74.2
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 7.1e-73 277.7 186 72.0
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 9.2e-73 277.3 186 73.1
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 1.2e-72 276.9 186 73.7
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 1.2e-72 276.9 186 72.0
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 1.6e-72 276.6 186 74.7
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 1.6e-72 276.6 187 73.3
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 1.6e-72 276.6 185 73.0
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 2.1e-72 276.2 186 74.2
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 2.1e-72 276.2 186 73.1
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 2.7e-72 275.8 187 72.7
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 3.5e-72 275.4 185 72.4
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 6.0e-72 274.6 186 72.6
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 7.8e-72 274.2 186 72.0
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 7.8e-72 274.2 186 73.1
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 1.0e-71 273.9 186 73.1
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 1.0e-71 273.9 185 71.9
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 1.0e-71 273.9 186 72.6
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 1.0e-71 273.9 186 73.1
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 1.3e-71 273.5 186 70.4
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 1.3e-71 273.5 186 73.1
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.7e-71 273.1 186 72.6
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 2.3e-71 272.7 186 72.6
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 3.0e-71 272.3 185 72.4
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 3.9e-71 271.9 186 72.6
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 5.1e-71 271.6 186 73.1
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 5.1e-71 271.6 186 72.6
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 5.1e-71 271.6 186 72.6
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 5.1e-71 271.6 186 71.0
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 6.6e-71 271.2 186 71.0
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 8.6e-71 270.8 183 72.1
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 8.6e-71 270.8 187 72.2
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.5e-70 270.0 186 71.5
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.9e-70 269.6 186 72.0
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.9e-70 269.6 186 71.5
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.9e-70 269.6 186 71.5
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 2.5e-70 269.2 186 72.6
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 2.5e-70 269.2 187 71.7
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 2.5e-70 269.2 187 71.1
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 3.3e-70 268.9 186 71.5
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 3.3e-70 268.9 187 71.7
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 5.6e-70 268.1 186 71.0
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 5.6e-70 268.1 186 71.0
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 7.3e-70 267.7 186 71.0
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 9.5e-70 267.3 186 70.4
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 1.2e-69 266.9 186 69.9
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 1.2e-69 266.9 187 70.6
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 1.6e-69 266.5 187 71.1
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 2.1e-69 266.2 183 71.0
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 4.7e-69 265.0 186 69.9
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 4.7e-69 265.0 186 70.4
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 4.7e-69 265.0 186 69.4
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 6.2e-69 264.6 186 68.3
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 8.1e-69 264.2 186 70.4
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 6.8e-68 261.2 186 67.2
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 6.8e-68 261.2 187 69.5
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 6.8e-68 261.2 186 68.3
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 8.9e-68 260.8 186 67.7
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 8.9e-68 260.8 186 69.4
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 1.2e-67 260.4 187 69.5
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 7.6e-67 257.7 186 67.2
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 9.9e-67 257.3 182 69.8
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 9.9e-67 257.3 188 70.2
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 1.7e-66 256.5 186 65.1
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 2.2e-66 256.1 177 72.3
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 2.9e-66 255.8 185 70.3
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 8.4e-66 254.2 186 66.1
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 8.4e-66 254.2 187 66.8
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 8.4e-66 254.2 187 66.8
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 8.4e-66 254.2 184 67.4
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.4e-65 253.4 179 70.4
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.4e-65 253.4 206 62.6
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 1.9e-65 253.1 187 67.4
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 1.9e-65 253.1 213 62.0
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 2.4e-65 252.7 187 66.3
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 3.2e-65 252.3 180 70.0
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 5.4e-65 251.5 187 66.3
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 5.4e-65 251.5 186 67.7
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 5.4e-65 251.5 183 67.2
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 1.6e-64 250.0 186 65.6
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 4.6e-64 248.4 186 65.1
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 3.0e-63 245.7 186 63.4
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 3.9e-63 245.4 187 64.2
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 7.3e-62 241.1 187 64.2
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 9.6e-62 240.7 186 65.1
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 2.1e-61 239.6 187 59.4
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 3.6e-61 238.8 186 64.5
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 3.1e-60 235.7 177 68.4
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 5.2e-60 235.0 187 63.6
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 1.5e-59 233.4 248 52.4
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 1.5e-59 233.4 181 64.6
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 4.9e-58 228.4 184 65.2
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.8e-53 212.6 141 75.9
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 9.3e-49 197.6 187 52.9
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 1.3e-47 193.7 187 56.7
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-47 192.6 186 54.8
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 4.8e-45 185.3 147 64.6
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 7.4e-38 161.4 112 73.2
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 1.8e-36 156.8 209 44.0
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 2.2e-34 149.8 117 59.0
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 5.1e-31 138.7 97 69.1
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 2.1e-29 133.3 193 44.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 3.1e-28 129.4 91 70.3
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 1.2e-27 127.5 67 92.5
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 6.5e-26 121.7 80 73.8
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 7.9e-24 114.8 89 66.3
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 1.0e-23 114.4 79 70.9
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 1.8e-23 113.6 72 76.4
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 6.7e-23 111.7 80 70.0
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 1.5e-22 110.5 155 40.6
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 2.4e-20 103.2 77 68.8
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-19 100.1 78 67.9
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 5.9e-19 98.6 85 61.2
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 1.4e-07 60.8 52 57.7


User provided reference genes

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