Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.5e-36 154.5 78 100.0
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.7e-36 153.3 77 97.4
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 6.1e-33 143.7 77 89.6
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-26 122.9 77 81.8
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.5e-26 122.5 77 80.5
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.5e-26 122.5 77 77.9
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.2e-26 121.3 78 78.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.2e-26 120.9 77 79.2
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.5e-26 120.6 77 80.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.7e-25 118.2 77 75.3
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.0e-24 114.4 77 77.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 8.8e-24 113.2 77 76.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.2e-23 112.8 77 74.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.2e-23 112.8 77 75.3
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.5e-23 112.5 77 75.3
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.0e-23 112.1 77 74.0
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.0e-23 112.1 77 74.0
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.0e-23 112.1 77 74.0
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.0e-23 112.1 77 74.0
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.6e-23 111.7 77 75.3
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.6e-23 111.7 77 74.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.4e-23 111.3 78 75.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 3.4e-23 111.3 77 72.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 3.4e-23 111.3 77 72.7
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.4e-23 110.9 77 72.7
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 4.4e-23 110.9 77 71.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 4.4e-23 110.9 77 71.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.4e-23 110.9 77 70.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 5.7e-23 110.5 77 72.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 5.7e-23 110.5 73 74.0
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 7.5e-23 110.2 77 74.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.5e-23 110.2 77 75.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 7.5e-23 110.2 77 72.7
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 9.8e-23 109.8 77 72.7
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 9.8e-23 109.8 77 71.4
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.3e-22 109.4 77 68.8
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-22 109.4 77 70.1
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-22 109.4 77 70.1
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.3e-22 109.4 77 70.1
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 1.7e-22 109.0 78 71.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.2e-22 108.6 77 72.7
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.2e-22 108.6 77 74.0
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.2e-22 108.6 77 72.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.2e-22 108.6 80 70.0
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.8e-22 108.2 77 72.7
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.8e-22 108.2 78 73.1
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.8e-22 108.2 77 70.1
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 2.8e-22 108.2 77 68.8
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.8e-22 108.2 77 74.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 3.7e-22 107.8 77 71.4
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.7e-22 107.8 77 74.0
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 4.9e-22 107.5 77 71.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 4.9e-22 107.5 77 71.4
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 4.9e-22 107.5 77 71.4
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 4.9e-22 107.5 77 72.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 4.9e-22 107.5 77 71.4
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.3e-22 107.1 77 70.1
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 6.3e-22 107.1 77 67.5
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 6.3e-22 107.1 77 70.1
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 6.3e-22 107.1 77 67.5
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 64.9
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 67.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 66.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 67.5
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 71.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 8.3e-22 106.7 77 67.5
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.1e-21 106.3 77 70.1
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.1e-21 106.3 77 70.1
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.1e-21 106.3 77 70.1
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.1e-21 106.3 77 70.1
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.1e-21 106.3 77 72.7
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.8e-21 105.5 77 70.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.4e-21 105.1 78 73.1
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.1e-21 104.8 77 70.1
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 4.1e-21 104.4 77 70.1
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 4.1e-21 104.4 78 71.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 5.4e-21 104.0 80 72.5
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.4e-21 104.0 77 68.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 7.0e-21 103.6 77 71.4
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 7.0e-21 103.6 78 67.9
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 7.0e-21 103.6 77 67.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 7.0e-21 103.6 78 70.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 7.0e-21 103.6 78 67.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 9.1e-21 103.2 78 67.9
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 9.1e-21 103.2 77 63.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.2e-20 102.8 77 66.2
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.6e-20 102.4 77 68.8
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.0e-20 102.1 77 70.1
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.5e-20 101.3 77 62.3
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.5e-20 101.3 77 68.8
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.9e-20 100.5 77 68.8
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.9e-20 100.5 77 68.8
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 5.9e-20 100.5 77 64.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.7e-20 100.1 77 66.2
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.0e-19 99.8 77 67.5
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.0e-19 99.8 77 67.5
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.0e-19 99.8 77 67.5
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.9e-19 98.2 77 63.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 5.0e-19 97.4 77 62.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.1e-18 96.3 76 61.8
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.5e-18 95.9 76 61.8
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-17 91.3 77 59.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 4.7e-17 90.9 75 69.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 5.2e-16 87.4 75 60.0
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.4e-15 84.3 82 57.3
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.7e-14 82.4 78 52.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.7e-14 82.4 68 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.9e-14 81.6 72 56.9
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 9.2e-13 76.6 76 51.3
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.5e-10 68.6 37 86.5
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.6e-09 65.9 47 70.2
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 4.7e-09 64.3 35 85.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 7.5e-07 57.0 37 75.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 4.9e-06 54.3 43 65.1


User provided reference genes

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