Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.9e-49 198.7 94 100.0
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.8e-48 194.9 94 96.8
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.9e-44 182.2 94 92.6
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 1.6e-40 169.1 97 83.5
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 8.4e-37 156.8 86 84.9
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 1.9e-36 155.6 88 80.7
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 9.3e-36 153.3 99 75.8
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 9.3e-36 153.3 87 81.6
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 1.6e-35 152.5 87 81.6
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 1.6e-35 152.5 86 83.7
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.6e-35 152.5 84 83.3
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 1.6e-35 152.5 84 83.3
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 3.5e-35 151.4 84 82.1
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.6e-35 151.0 84 81.0
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 4.6e-35 151.0 86 81.4
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 6.0e-35 150.6 86 80.2
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 7.9e-35 150.2 86 82.6
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.0e-34 149.8 94 75.5
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 1.0e-34 149.8 87 81.6
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 1.0e-34 149.8 87 81.6
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 1.0e-34 149.8 86 80.2
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 1.3e-34 149.4 87 80.5
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.3e-34 149.4 87 77.0
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.8e-34 149.1 86 81.4
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.8e-34 149.1 87 80.5
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 3.0e-34 148.3 87 78.2
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 3.0e-34 148.3 87 79.3
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 3.9e-34 147.9 86 77.9
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 3.9e-34 147.9 87 79.3
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.9e-34 147.9 87 79.3
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.9e-34 147.9 83 80.7
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.9e-34 147.9 83 80.7
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 3.9e-34 147.9 83 80.7
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 6.7e-34 147.1 86 79.1
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 8.7e-34 146.7 87 78.2
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 8.7e-34 146.7 86 80.2
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.1e-33 146.4 86 77.9
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.1e-33 146.4 87 78.2
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 1.5e-33 146.0 87 78.2
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 1.5e-33 146.0 87 79.3
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 1.5e-33 146.0 87 79.3
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 2.5e-33 145.2 84 79.8
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 2.5e-33 145.2 86 77.9
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 3.3e-33 144.8 96 75.0
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 3.3e-33 144.8 87 78.2
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 5.6e-33 144.1 84 77.4
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 5.6e-33 144.1 87 78.2
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 5.6e-33 144.1 83 83.1
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 5.6e-33 144.1 83 83.1
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 5.6e-33 144.1 87 77.0
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 7.4e-33 143.7 84 78.6
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 7.4e-33 143.7 87 77.0
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.3e-32 142.9 86 79.1
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.6e-32 142.5 89 77.5
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 1.6e-32 142.5 82 80.5
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 2.1e-32 142.1 86 77.9
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 2.8e-32 141.7 85 77.6
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 4.8e-32 141.0 89 77.5
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 4.8e-32 141.0 87 74.7
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 6.2e-32 140.6 86 79.1
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 78.2
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 79.3
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 79.3
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 79.3
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 78.2
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 6.2e-32 140.6 87 78.2
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 8.1e-32 140.2 86 79.1
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 8.1e-32 140.2 86 79.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 8.1e-32 140.2 86 79.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.1e-31 139.8 87 79.3
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 1.4e-31 139.4 81 77.8
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-31 139.0 87 78.2
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-31 139.0 87 78.2
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-31 139.0 86 77.9
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.8e-31 139.0 87 78.2
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.8e-31 139.0 86 77.9
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.8e-31 139.0 86 77.9
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.8e-31 139.0 87 78.2
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 2.4e-31 138.7 82 76.8
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 2.4e-31 138.7 82 76.8
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 2.4e-31 138.7 82 76.8
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 2.4e-31 138.7 82 76.8
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 3.1e-31 138.3 87 74.7
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 5.3e-31 137.5 86 76.7
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 6.9e-31 137.1 85 75.3
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 3.4e-30 134.8 85 72.9
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 4.5e-30 134.4 76 77.6
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 9.9e-30 133.3 87 73.6
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 9.9e-30 133.3 82 78.0
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 9.9e-30 133.3 86 72.1
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 3.8e-29 131.3 85 72.9
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 4.9e-29 131.0 89 70.8
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 5.5e-28 127.5 104 60.6
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 7.1e-28 127.1 78 74.4
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.6e-27 125.9 79 70.9
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 3.5e-27 124.8 83 67.5
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 7.4e-25 117.1 86 66.3
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 2.1e-24 115.5 63 82.5
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.8e-24 115.2 63 84.1
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.2e-24 114.0 75 72.0
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 6.5e-21 104.0 63 77.8
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 1.9e-20 102.4 59 76.3
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.2e-19 99.8 50 84.0
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 2.1e-19 99.0 63 71.4
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 2.7e-19 98.6 50 84.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 2.6e-14 82.0 56 60.7
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 2.9e-13 78.6 58 62.1
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 1.6e-11 72.8 58 58.6
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.8e-08 61.2 41 73.2
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 8.2e-08 60.5 42 69.0
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.1e-07 60.1 34 79.4


User provided reference genes

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