Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.7e-134 482.6 245 100.0
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 7.9e-87 324.3 175 96.0
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 6.5e-65 251.5 175 78.9
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 3.0e-62 242.7 176 75.6
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 1.8e-59 233.4 176 75.6
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.4e-46 190.7 175 62.9
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 5.2e-46 188.7 175 62.9
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.4e-43 180.6 175 60.6
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.0e-43 178.3 173 54.9
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 2.7e-42 176.4 175 53.7
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.7e-42 176.4 175 53.7
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 4.6e-42 175.6 179 53.6
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.6e-42 175.6 173 54.3
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 4.6e-42 175.6 175 54.3
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 5.9e-42 175.3 175 53.7
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.7e-41 173.7 175 53.1
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 1.7e-41 173.7 180 52.8
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.3e-41 173.3 180 52.8
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.6e-41 171.8 175 53.1
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.6e-41 171.8 175 53.1
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 1.1e-40 171.0 172 54.7
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 1.9e-40 170.2 175 54.3
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 1.9e-40 170.2 174 51.1
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.3e-40 169.5 178 53.9
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 4.3e-40 169.1 173 54.9
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 4.3e-40 169.1 211 48.3
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 9.5e-40 167.9 175 52.0
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 9.5e-40 167.9 175 51.4
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 2.1e-39 166.8 175 52.0
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 2.1e-39 166.8 169 53.3
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.1e-39 166.8 175 53.1
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 3.6e-39 166.0 175 52.0
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 4.7e-39 165.6 172 51.7
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 4.7e-39 165.6 179 53.1
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.1e-38 164.5 176 52.8
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 2.3e-38 163.3 179 50.8
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.1e-38 162.9 178 52.8
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 5.2e-38 162.2 174 50.0
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 6.8e-38 161.8 175 49.1
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 6.8e-38 161.8 175 49.1
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 8.9e-38 161.4 179 50.3
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 8.9e-38 161.4 178 52.2
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 8.9e-38 161.4 198 50.0
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 1.5e-37 160.6 178 51.7
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 2.0e-37 160.2 175 49.1
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.6e-37 159.8 176 50.6
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 3.4e-37 159.5 175 50.3
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 3.4e-37 159.5 178 52.8
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 4.4e-37 159.1 215 43.3
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 4.4e-37 159.1 176 53.4
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 4.4e-37 159.1 178 52.8
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 4.4e-37 159.1 173 50.9
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 5.8e-37 158.7 175 50.3
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 5.8e-37 158.7 175 49.1
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 5.8e-37 158.7 178 53.4
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 7.5e-37 158.3 179 50.8
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 7.5e-37 158.3 175 49.1
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 7.5e-37 158.3 175 48.6
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 7.5e-37 158.3 172 51.2
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 9.8e-37 157.9 171 49.7
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 9.8e-37 157.9 175 50.9
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 2.2e-36 156.8 180 51.1
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 2.9e-36 156.4 178 51.7
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 2.9e-36 156.4 180 50.6
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 4.9e-36 155.6 175 51.4
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 1.4e-35 154.1 175 49.7
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 3.2e-35 152.9 178 48.3
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 1.2e-34 151.0 177 52.5
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 1.2e-34 151.0 175 49.7
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 1.2e-34 151.0 175 51.4
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 2.0e-34 150.2 174 50.0
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 2.0e-34 150.2 175 49.1
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 7.8e-34 148.3 175 49.1
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 1.3e-33 147.5 180 50.6
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 2.3e-33 146.7 175 47.4
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 5.0e-33 145.6 175 47.4
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 8.6e-33 144.8 175 46.9
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 8.6e-33 144.8 177 48.0
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 1.5e-32 144.1 175 48.0
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 1.9e-32 143.7 175 45.7
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 2.5e-32 143.3 175 47.4
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 2.5e-32 143.3 175 46.3
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 9.5e-32 141.4 175 47.4
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 1.2e-31 141.0 176 47.2
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 1.6e-31 140.6 175 47.4
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 2.8e-31 139.8 176 49.4
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 3.6e-31 139.4 175 44.6
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 4.7e-31 139.0 175 48.6
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 6.2e-31 138.7 175 48.6
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.1e-30 137.9 174 47.1
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 1.4e-30 137.5 175 44.6
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 1.8e-30 137.1 175 42.9
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 5.2e-30 135.6 175 44.0
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 6.8e-30 135.2 176 43.8
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 6.8e-30 135.2 179 45.8
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 8.9e-30 134.8 175 42.3
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 8.9e-30 134.8 179 47.5
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 4.4e-29 132.5 175 42.9
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 5.8e-29 132.1 175 42.9
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 5.8e-29 132.1 129 51.9
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 7.5e-29 131.7 180 44.4
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 7.5e-29 131.7 175 44.0
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 7.5e-29 131.7 175 41.7
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 7.5e-29 131.7 175 41.7
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 9.9e-29 131.3 175 45.7
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 9.9e-29 131.3 175 45.7
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 9.9e-29 131.3 175 45.7
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 9.9e-29 131.3 172 43.6
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 2.9e-28 129.8 175 42.9
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 6.4e-28 128.6 175 46.9
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 6.4e-28 128.6 176 43.8
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 6.4e-28 128.6 174 46.0
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 8.3e-28 128.3 175 45.1
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 8.3e-28 128.3 134 50.7
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 1.1e-27 127.9 177 45.8
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 1.4e-27 127.5 176 48.3
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 1.9e-27 127.1 175 44.6
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 2.4e-27 126.7 175 42.3
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 9.2e-27 124.8 147 42.9
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 3.0e-25 119.8 180 41.1
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 3.9e-25 119.4 177 43.5
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 5.1e-25 119.0 175 42.9
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 1.1e-24 117.9 118 53.4
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 4.3e-24 115.9 177 41.2
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 4.7e-23 112.5 179 43.6
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 6.8e-22 108.6 129 45.7
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 8.9e-22 108.2 185 42.7
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 2.0e-21 107.1 191 39.3
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.1e-19 101.3 147 38.8
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 5.1e-17 92.4 81 58.0
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 5.6e-16 89.0 175 38.3
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 9.6e-16 88.2 175 37.1
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 3.8e-12 76.3 60 60.0
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 1.4e-11 74.3 46 80.4
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 1.6e-10 70.9 172 37.8
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 1.5e-08 64.3 133 36.8
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.5e-08 64.3 75 48.0
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 2.8e-07 60.1 178 34.3
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 2.8e-07 60.1 178 34.3
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 4.0e-06 56.2 163 31.9
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.9e-06 55.5 75 44.0
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 9.0e-06 55.1 79 40.5


User provided reference genes

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