Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 8.5e-151 537.0 268 100.0
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 8.3e-138 493.8 255 94.9
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 1.1e-118 430.3 317 70.7
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 2.3e-111 406.0 267 73.8
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.3e-103 380.2 269 69.1
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.1e-102 377.1 269 68.0
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 3.3e-102 375.6 253 69.6
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 5.6e-102 374.8 268 66.4
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 7.3e-102 374.4 256 68.0
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.6e-101 373.2 268 66.4
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 2.8e-101 372.5 267 67.0
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 3.6e-101 372.1 253 70.0
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 3.6e-101 372.1 253 70.0
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 4.7e-101 371.7 253 68.8
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 8.1e-101 370.9 257 68.5
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 8.1e-101 370.9 253 68.4
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.1e-100 370.5 268 67.5
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 1.8e-100 369.8 267 67.8
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 1.8e-100 369.8 256 69.1
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 5.2e-100 368.2 258 66.7
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.9e-100 367.5 267 67.0
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.2e-99 367.1 253 69.2
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.5e-99 366.7 258 66.3
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 2.6e-99 365.9 263 65.4
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 3.4e-99 365.5 256 67.2
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 7.6e-99 364.4 244 69.3
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 7.6e-99 364.4 267 66.7
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 2.9e-98 362.5 255 65.9
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 2.9e-98 362.5 248 68.1
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.8e-98 362.1 267 66.7
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 4.9e-98 361.7 273 65.6
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.4e-98 361.3 267 66.7
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.4e-98 361.3 267 66.7
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.4e-98 360.9 267 67.0
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 1.1e-97 360.5 223 75.8
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.9e-97 359.8 255 67.1
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 3.2e-97 359.0 267 66.7
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 5.4e-97 358.2 253 66.8
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 5.4e-97 358.2 253 66.8
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 5.4e-97 358.2 269 63.9
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 1.6e-96 356.7 257 64.6
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 1.6e-96 356.7 255 65.5
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 2.1e-96 356.3 253 67.2
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 1.3e-95 353.6 257 66.1
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 1.7e-95 353.2 256 66.0
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.7e-95 353.2 256 66.8
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 3.9e-95 352.1 255 63.5
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 3.9e-95 352.1 256 64.5
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 8.7e-95 350.9 252 65.1
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 2.5e-94 349.4 258 62.0
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 5.6e-94 348.2 241 66.4
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 5.6e-94 348.2 247 65.6
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 7.3e-94 347.8 252 66.3
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 9.6e-94 347.4 297 57.6
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 1.2e-93 347.1 267 62.5
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 2.1e-93 346.3 245 64.5
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 2.1e-93 346.3 264 61.7
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 2.8e-93 345.9 252 64.7
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 4.7e-93 345.1 252 63.5
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 4.7e-93 345.1 258 63.6
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 6.2e-93 344.7 252 64.3
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.4e-92 343.6 270 63.3
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.8e-92 343.2 250 63.6
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 1.8e-92 343.2 252 62.7
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.4e-92 342.8 252 65.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 4.0e-92 342.0 239 66.5
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 6.9e-92 341.3 277 60.6
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.2e-91 340.5 255 62.0
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.2e-91 340.5 254 62.2
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 2.6e-91 339.3 252 61.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 2.6e-91 339.3 250 62.4
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 5.8e-91 338.2 262 61.5
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 5.8e-91 338.2 252 61.1
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 1.3e-90 337.0 288 58.0
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 1.7e-90 336.7 240 65.8
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 2.9e-90 335.9 254 61.4
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 3.8e-90 335.5 246 63.0
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 4.9e-90 335.1 251 60.6
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.1e-89 334.0 252 60.3
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 1.1e-89 334.0 268 60.8
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.1e-89 334.0 257 58.8
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 1.4e-89 333.6 246 62.6
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 3.2e-89 332.4 252 59.5
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 4.2e-89 332.0 254 61.4
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.6e-88 330.1 257 58.8
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 3.5e-88 328.9 251 59.4
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 4.6e-88 328.6 260 58.8
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 6.0e-88 328.2 252 59.5
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 7.8e-88 327.8 256 59.4
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 7.8e-88 327.8 239 64.4
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 7.8e-88 327.8 252 59.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.7e-87 326.6 268 58.2
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.7e-87 326.6 268 58.2
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 2.3e-87 326.2 253 58.5
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 8.7e-87 324.3 253 58.1
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 8.7e-87 324.3 253 58.1
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.5e-86 323.6 257 57.6
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 1.9e-86 323.2 222 67.6
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 7.3e-86 321.2 252 57.9
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.6e-85 320.1 247 58.7
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 3.6e-85 318.9 252 57.1
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 3.6e-85 318.9 255 57.6
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 1.8e-84 316.6 244 63.5
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 5.3e-84 315.1 252 57.1
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.3e-82 310.5 258 55.8
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 3.8e-82 308.9 267 55.1
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.2e-80 303.9 252 59.5
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 6.0e-80 301.6 253 56.9
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 7.9e-80 301.2 179 77.1
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 8.7e-79 297.7 217 63.6
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.5e-78 297.0 274 53.6
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 9.6e-78 294.3 198 68.7
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.8e-77 292.7 198 68.7
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 4.0e-76 288.9 189 70.9
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 2.6e-75 286.2 204 65.2
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 2.2e-74 283.1 188 68.1
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 1.3e-71 273.9 249 54.2
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 9.6e-70 267.7 259 51.4
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.1e-69 266.5 226 54.4
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 3.8e-66 255.8 242 53.3
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.9e-65 253.4 255 50.2
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 3.3e-62 242.7 194 55.2
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.3e-62 242.3 179 60.3
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 4.3e-62 242.3 222 49.1
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 2.5e-57 226.5 196 52.6
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 3.2e-57 226.1 168 60.1
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 7.2e-57 224.9 232 50.4
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 4.3e-54 215.7 254 45.3
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 1.4e-52 210.7 128 74.2
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 4.1e-52 209.1 254 47.6
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 3.6e-48 196.1 139 67.6
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.7e-47 191.8 291 39.2
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.0e-46 190.3 137 65.0
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.3e-45 187.6 126 69.8
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 3.1e-44 183.0 129 60.5
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.2e-43 181.0 225 40.0
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.9e-41 173.7 136 58.8
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.2e-41 172.6 108 72.2
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 4.7e-40 169.1 236 39.0
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 2.3e-39 166.8 196 47.4
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 1.2e-35 154.5 112 65.2
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 1.4e-28 131.0 79 79.7
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.1e-25 121.3 113 54.0
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 9.1e-20 101.7 65 67.7
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.7e-19 100.1 82 56.1
Ah.04g150580 Amaranthus hybridus HOM05D004915 ORTHO05D006048 5.5e-17 92.4 69 69.6
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 9.5e-17 91.7 60 70.0
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 6.6e-10 68.9 66 53.0
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.4e-07 61.2 127 29.1


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