Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020949 Chenopodium quinoa HOM05D007561 ORTHO05D007661 1.2e-276 956.1 534 100.0
AUR62018475 Chenopodium quinoa HOM05D007561 ORTHO05D007661 9.0e-253 876.7 545 89.4
Ah.04g149900 Amaranthus hybridus HOM05D007561 ORTHO05D007661 2.2e-182 642.9 550 71.1
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 1.2e-66 258.5 569 42.9
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 1.9e-64 251.1 538 40.7
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 5.4e-64 249.6 558 40.5
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 1.3e-62 245.0 571 43.4
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 1.3e-62 245.0 545 39.1
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 2.3e-62 244.2 507 40.4
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 3.0e-62 243.8 530 40.2
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.5e-61 241.5 566 42.8
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 2.5e-61 240.7 510 40.0
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 1.3e-57 228.4 551 38.7
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 1.7e-57 228.0 537 38.5
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 6.4e-57 226.1 496 40.7
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 5.4e-56 223.0 556 36.7
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 3.3e-53 213.8 531 37.5
Sc13g0000670 Simmondsia chinensis HOM05D007561 ORTHO05D007661 1.3e-52 211.8 515 39.2
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 1.6e-52 211.5 548 37.0
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 2.1e-52 211.1 536 37.5
MSTRG.6258 Avicennia marina HOM05D007561 ORTHO05D007661 4.8e-52 209.9 523 40.7
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 8.1e-52 209.1 548 39.1
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 8.1e-52 209.1 542 38.7
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 4.0e-51 206.8 547 40.0
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 6.9e-51 206.1 511 35.4
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 1.2e-50 205.3 538 36.6
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 1.5e-50 204.9 564 39.9
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 2.0e-50 204.5 538 37.7
Peaxi162Scf00575g00079 Petunia axillaris HOM05D007561 ORTHO05D007661 2.2e-49 201.1 507 37.9
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 8.4e-49 199.1 535 35.7
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 2.4e-48 197.6 523 39.2
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 3.5e-47 193.7 559 33.5
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 1.0e-46 192.2 532 35.2
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 1.3e-46 191.8 521 35.9
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 3.9e-46 190.3 523 40.2
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 3.9e-46 190.3 482 38.2
Thecc.05G190500 Theobroma cacao HOM05D007561 ORTHO05D007661 3.3e-45 187.2 500 36.0
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 5.6e-45 186.4 536 34.3
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 1.3e-44 185.3 545 34.7
Actinidia18379 Actinidia chinensis HOM05D007561 ORTHO05D007661 3.4e-42 177.2 525 36.2
SGA_v2.0_scaffold66G22349 Striga asiatica HOM05D007561 ORTHO05D007661 1.3e-41 175.3 420 38.6
MELO3C009692.2 Cucumis melo HOM05D007561 ORTHO05D007661 2.2e-41 174.5 554 36.3
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 2.9e-41 174.1 489 34.8
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 6.4e-41 172.9 544 31.1
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 8.4e-41 172.6 504 35.1
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 3.2e-40 170.6 504 35.5
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 4.2e-40 170.2 504 34.9
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 5.4e-40 169.9 527 32.4
Medtr7g088200 Medicago truncatula HOM05D007561 ORTHO05D007661 5.4e-40 169.9 517 31.9
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 2.1e-39 167.9 553 35.1
Sed0023829 Sechium edule HOM05D007561 ORTHO05D007661 2.1e-39 167.9 544 36.6
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 1.0e-38 165.6 524 31.9
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 1.3e-38 165.2 539 36.2
Eucgr.A02170 Eucalyptus grandis HOM05D007561 ORTHO05D007661 1.8e-38 164.9 568 33.6
SGA_v2.0_scaffold69G23211 Striga asiatica HOM05D007561 ORTHO05D007661 3.0e-38 164.1 512 35.7
GSVIVG01029894001 Vitis vinifera HOM05D007561 ORTHO05D007661 8.7e-38 162.5 437 33.9
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.9e-37 161.4 448 35.3
Psat3g083040 Pisum sativum HOM05D007561 ORTHO05D007661 1.9e-37 161.4 554 30.1
RcHm_v2.0_Chr3g0495011 Rosa chinensis HOM05D007561 ORTHO05D007661 1.6e-36 158.3 608 30.6
FvH4_4g10470 Fragaria vesca HOM05D007561 ORTHO05D007661 6.2e-36 156.4 612 31.0
HPP92_021156 Vanilla planifolia HOM05D007561 ORTHO05D007661 6.2e-36 156.4 411 34.3
FAN12G0994 Fragaria x ananassa HOM05D007561 ORTHO05D007661 8.1e-36 156.0 582 31.4
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 1.4e-35 155.2 546 32.8
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 1.8e-35 154.8 541 33.6
FAN12G2197 Fragaria x ananassa HOM05D007561 ORTHO05D007661 2.4e-35 154.5 612 30.9
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 5.3e-35 153.3 511 34.4
FAN07G2764 Fragaria x ananassa HOM05D007561 ORTHO05D007661 6.9e-35 152.9 580 31.6
FAN17G1891 Fragaria x ananassa HOM05D007561 ORTHO05D007661 1.5e-34 151.8 563 30.9
Gohir.D04G022850 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.5e-34 151.8 448 34.4
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 5.8e-34 149.8 548 34.7
FAN22G1656 Fragaria x ananassa HOM05D007561 ORTHO05D007661 1.3e-33 148.7 597 29.8
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 3.2e-32 144.1 548 31.8
CANSAT78G1013 Cannabis sativa HOM05D007561 ORTHO05D007661 9.3e-32 142.5 522 33.1
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 6.7e-30 136.3 500 32.2
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 2.5e-29 134.4 544 31.1
PSO339G6289 Papaver somniferum HOM05D007561 ORTHO05D007661 1.6e-28 131.7 521 30.9
QL02p091854 Quercus lobata HOM05D007561 ORTHO05D007661 1.6e-28 131.7 413 34.6
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 2.1e-28 131.3 473 34.5
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 3.7e-28 130.6 494 30.8
PSO384G3070 Papaver somniferum HOM05D007561 ORTHO05D007661 6.2e-28 129.8 591 29.1
unitig_899.g15656 Utricularia gibba HOM05D007561 ORTHO05D007661 9.3e-24 115.9 386 30.3
MD12G1110900 Malus domestica HOM05D007561 ORTHO05D007661 1.0e-22 112.5 584 30.3
Migut.K00204 Erythranthe guttata HOM05D007561 ORTHO05D007661 2.4e-19 101.3 455 31.2
PGR042G3883 Punica granatum HOM05D007561 ORTHO05D007661 1.2e-18 99.0 443 29.3
COL.COLO4_05647 Corchorus olitorius HOM05D007561 ORTHO05D007661 2.6e-18 97.8 523 30.2
TPR.G23681 Trifolium pratense HOM05D007561 ORTHO05D007661 5.9e-18 96.7 322 31.4
BcaB05g21770 Brassica carinata HOM05D011214 ORTHO05D007661 1.3e-17 95.5 487 27.7
THA.LOC104816415 Tarenaya hassleriana HOM05D011214 ORTHO05D007661 6.5e-17 93.2 510 27.8
CARHR209070 Cardamine hirsuta HOM05D011214 ORTHO05D007661 3.2e-16 90.9 489 28.2
C02p01830 Brassica napus HOM05D011214 ORTHO05D007661 1.6e-15 88.6 485 28.0
AT5G04190 Arabidopsis thaliana HOM05D011214 ORTHO05D007661 2.1e-15 88.2 493 28.4
BcaC06g32123 Brassica carinata HOM05D011214 ORTHO05D007661 7.9e-15 86.3 486 27.8
AL6G13810 Arabidopsis lyrata HOM05D011214 ORTHO05D007661 1.8e-14 85.1 501 27.3
BolC2t06140H Brassica oleracea HOM05D011214 ORTHO05D007661 2.3e-14 84.7 485 27.8
Thhalv10015710m.g Eutrema salsugineum HOM05D011214 ORTHO05D007661 2.3e-14 84.7 490 28.2
BraA10t45239Z Brassica rapa HOM05D011214 ORTHO05D007661 3.0e-14 84.3 491 27.7
Sp6g38560 Schrenkiella parvula HOM05D011214 ORTHO05D007661 3.9e-14 84.0 487 26.7
SEGI_17426 Sequoiadendron giganteum HOM05D007561 ORTHO05D007661 3.9e-14 84.0 488 27.7
BcaC03g12952 Brassica carinata HOM05D011214 ORTHO05D007661 5.1e-14 83.6 483 27.1
A10p31950 Brassica napus HOM05D011214 ORTHO05D007661 6.7e-14 83.2 491 27.7
BolC9t60006H Brassica oleracea HOM05D011214 ORTHO05D007661 6.7e-14 83.2 483 27.5
Carub.0006s0314 Capsella rubella HOM05D011214 ORTHO05D007661 6.7e-14 83.2 426 28.9
PGR142G0684 Punica granatum HOM05D007561 ORTHO05D007661 6.7e-14 83.2 472 27.5
BcaC06g32122 Brassica carinata HOM05D011214 ORTHO05D007661 4.3e-13 80.5 483 27.1
Sc19g0007720 Simmondsia chinensis HOM05D007561 ORTHO05D007661 4.3e-13 80.5 288 34.7
C09p72660 Brassica napus HOM05D011214 ORTHO05D007661 9.7e-13 79.3 483 26.7
VMungo0464G1428 Vigna mungo HOM05D025134 ORTHO05D020753 2.2e-12 78.2 364 30.2
MBI15_g01650_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 3.7e-12 77.4 84 54.8
BraA02t04803Z Brassica rapa HOM05D011214 ORTHO05D007661 1.8e-11 75.1 488 25.8
Zm00001eb333260 Zea mays HOM05D007561 ORTHO05D007661 2.4e-11 74.7 506 27.5
Prupe.7G023100 Prunus persica HOM05D007561 ORTHO05D007661 4.1e-11 73.9 373 27.3
Phvul.004G052600 Phaseolus vulgaris HOM05D025134 ORTHO05D020753 5.3e-11 73.6 359 29.2
CDE09G0510 Ceratophyllum demersum HOM05D044076 ORTHO05D007661 3.4e-10 70.9 325 27.4
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 5.9e-10 70.1 457 25.6
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 5.9e-10 70.1 457 25.6
SGA_v2.0_scaffold139G35361 Striga asiatica HOM05D007561 ORTHO05D007661 1.1e-08 65.9 51 62.7
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 3.2e-08 64.3 444 25.7
CDE08G0002 Ceratophyllum demersum HOM05D044076 ORTHO05D007661 3.2e-08 64.3 317 26.8
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 3.2e-08 64.3 439 24.6
MBI14_g08053_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 4.2e-08 63.9 111 45.9
SalBow7G1820 Salvia bowleyana HOM05D017717 ORTHO05D007661 5.5e-08 63.5 116 43.1
HanXRQChr12g0362591 Helianthus annuus HOM05D002654 ORTHO05D002430 1.6e-07 62.0 412 25.5
DCAR_016891 Daucus carota HOM05D007561 ORTHO05D007661 2.1e-07 61.6 327 26.0
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 6.1e-07 60.1 425 22.6
Nn3g17221 Nelumbo nucifera HOM05D002654 ORTHO05D002430 1.4e-06 58.9 458 24.2
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 3.0e-06 57.8 447 23.5
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 3.9e-06 57.4 447 23.5


User provided reference genes

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