Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 5.0e-100 367.9 196 100.0
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 9.5e-67 257.3 237 63.7
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 9.9e-64 247.3 134 97.0
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 9.9e-56 220.7 246 55.7
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 3.5e-45 185.7 234 51.3
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 6.0e-45 184.9 234 51.3
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 7.8e-45 184.5 241 49.0
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.0e-44 184.1 240 51.7
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.1e-44 181.8 234 50.9
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 6.6e-44 181.4 234 50.4
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 1.9e-43 179.9 236 47.5
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.9e-43 179.9 234 50.4
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 3.3e-43 179.1 233 48.9
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 4.3e-43 178.7 241 47.3
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 4.3e-43 178.7 233 50.6
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 5.6e-43 178.3 235 50.2
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 5.6e-43 178.3 237 49.8
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 5.6e-43 178.3 242 49.6
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 5.6e-43 178.3 135 69.6
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.3e-42 177.2 245 48.2
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.1e-42 176.4 234 49.6
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 2.1e-42 176.4 167 58.7
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 2.1e-42 176.4 233 48.9
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 3.6e-42 175.6 231 50.2
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 4.8e-42 175.3 202 54.5
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 4.8e-42 175.3 203 51.2
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.1e-41 174.1 243 50.2
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 1.4e-41 173.7 206 53.4
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 5.3e-41 171.8 233 48.5
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 5.3e-41 171.8 203 51.2
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 6.9e-41 171.4 234 49.1
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 1.5e-40 170.2 235 48.5
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 5.8e-40 168.3 234 47.9
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 5.8e-40 168.3 135 66.7
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 7.6e-40 167.9 242 45.5
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 7.6e-40 167.9 242 45.9
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.3e-39 167.2 136 64.7
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 2.9e-39 166.0 136 64.0
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 4.9e-39 165.2 244 48.0
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 6.4e-39 164.9 136 63.2
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 6.4e-39 164.9 202 50.5
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.4e-38 163.7 243 45.3
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.4e-38 163.7 135 63.7
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 1.9e-38 163.3 230 46.5
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 3.2e-38 162.5 233 47.6
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 4.2e-38 162.2 151 60.3
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 5.4e-38 161.8 136 65.4
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 5.4e-38 161.8 203 49.3
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 7.1e-38 161.4 135 65.9
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 7.1e-38 161.4 136 62.5
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 9.3e-38 161.0 151 60.3
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 9.3e-38 161.0 204 48.5
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.6e-37 160.2 242 45.5
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 1.0e-36 157.5 236 45.3
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.0e-36 157.5 224 45.5
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 1.8e-36 156.8 136 60.3
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 3.0e-36 156.0 210 48.1
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 5.1e-36 155.2 240 47.1
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 5.1e-36 155.2 285 41.4
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 6.7e-36 154.8 136 59.6
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 1.5e-35 153.7 164 57.3
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 2.5e-35 152.9 137 60.6
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 2.1e-34 149.8 249 45.0
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 2.8e-34 149.4 207 45.9
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 3.7e-34 149.1 206 48.5
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 4.8e-34 148.7 237 43.0
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 1.4e-33 147.1 228 43.4
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.8e-33 146.7 214 43.9
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.8e-33 146.7 203 49.3
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 2.4e-33 146.4 217 46.5
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 2.4e-33 146.4 217 46.5
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 2.4e-33 146.4 217 46.5
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 3.1e-33 146.0 226 43.8
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.1e-33 146.0 179 52.0
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 3.1e-33 146.0 148 57.4
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 4.0e-33 145.6 203 48.3
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 9.0e-33 144.4 136 56.6
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 9.0e-33 144.4 136 56.6
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.2e-32 144.1 136 57.4
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 2.6e-32 142.9 203 47.8
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 2.6e-32 142.9 140 57.9
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 2.6e-32 142.9 140 57.9
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 7.6e-32 141.4 133 56.4
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 7.6e-32 141.4 232 41.4
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 1.7e-31 140.2 210 41.9
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 1.4e-30 137.1 137 56.2
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.9e-30 136.7 140 55.0
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.2e-29 134.0 135 54.8
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 7.9e-29 131.3 221 43.4
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.1e-27 127.5 132 51.5
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.3e-26 124.0 104 62.5
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.3e-26 124.0 104 62.5
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 6.2e-26 121.7 118 53.4
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.1e-25 120.9 191 44.5
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.8e-25 120.2 109 61.5
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 2.0e-24 116.7 104 61.5
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 7.1e-22 108.2 129 48.1
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.3e-20 104.0 162 40.1
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 3.3e-19 99.4 159 45.3
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.5e-14 83.2 110 42.7
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.0e-07 61.2 108 36.1
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 8.5e-07 58.2 96 35.4
Glyma.04G055801 Glycine max HOM05D007323 ORTHO05D009238 3.2e-06 56.2 95 42.1


User provided reference genes

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