Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.1e-63 245.0 124 100.0
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 9.7e-41 170.2 175 60.0
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.1e-31 140.2 86 81.4
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.1e-23 113.6 68 79.4
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 7.0e-23 110.9 68 77.9
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 4.0e-18 95.1 84 54.8
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 8.3e-16 87.4 63 69.8
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 9.1e-15 84.0 66 62.1
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.2e-14 83.6 68 58.8
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.6e-14 83.2 45 77.8
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.6e-14 83.2 45 77.8
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.6e-14 83.2 52 67.3
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 3.5e-14 82.0 66 59.1
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 3.5e-14 82.0 43 81.4
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 5.9e-14 81.3 45 75.6
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 5.9e-14 81.3 53 64.2
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 5.9e-14 81.3 53 64.2
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 7.7e-14 80.9 66 59.1
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 7.7e-14 80.9 43 79.1
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 7.7e-14 80.9 46 76.1
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 7.7e-14 80.9 66 59.1
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 7.7e-14 80.9 43 81.4
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 7.7e-14 80.9 43 81.4
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.7e-13 79.7 43 79.1
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.7e-13 79.7 43 79.1
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.7e-13 79.7 66 54.5
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 1.7e-13 79.7 78 51.3
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 1.7e-13 79.7 78 51.3
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.7e-13 79.7 78 51.3
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.2e-13 79.3 43 76.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 2.9e-13 79.0 43 74.4
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.9e-13 79.0 73 50.7
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.9e-13 79.0 63 63.5
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 2.9e-13 79.0 107 43.0
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 2.9e-13 79.0 47 72.3
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.9e-13 79.0 43 79.1
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 2.9e-13 79.0 43 79.1
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.8e-13 78.6 43 79.1
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 5.0e-13 78.2 62 59.7
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 5.0e-13 78.2 47 70.2
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 6.5e-13 77.8 43 74.4
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 6.5e-13 77.8 73 50.7
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 6.5e-13 77.8 43 74.4
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 6.5e-13 77.8 49 67.3
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 6.5e-13 77.8 66 59.1
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 8.5e-13 77.4 49 67.3
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.1e-12 77.0 92 44.6
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.5e-12 76.6 60 56.7
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 1.5e-12 76.6 73 49.3
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.5e-12 76.6 43 74.4
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 1.5e-12 76.6 47 68.1
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.5e-12 76.6 43 74.4
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 1.9e-12 76.3 49 65.3
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 2.5e-12 75.9 43 72.1
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 2.5e-12 75.9 43 74.4
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.5e-12 75.9 49 65.3
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 2.5e-12 75.9 49 65.3
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.5e-12 75.9 43 72.1
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.5e-12 75.9 43 72.1
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 3.2e-12 75.5 43 74.4
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 4.2e-12 75.1 64 56.2
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 4.2e-12 75.1 43 69.8
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 5.5e-12 74.7 68 51.5
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 5.5e-12 74.7 70 55.7
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 7.2e-12 74.3 43 69.8
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 9.4e-12 73.9 49 65.3
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.6e-11 73.2 64 54.7
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.6e-11 73.2 64 54.7
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.6e-11 73.2 58 60.3
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 2.1e-11 72.8 48 60.4
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 2.1e-11 72.8 43 74.4
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.7e-11 72.4 62 56.5
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 2.7e-11 72.4 44 65.9
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 3.6e-11 72.0 45 66.7
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 3.6e-11 72.0 43 69.8
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 4.7e-11 71.6 45 66.7
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 6.1e-11 71.2 43 69.8
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 8.0e-11 70.9 49 63.3
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 8.0e-11 70.9 45 66.7
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 8.0e-11 70.9 43 72.1
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 1.0e-10 70.5 53 60.4
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.4e-10 70.1 43 69.8
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.8e-10 69.7 48 64.6
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 1.8e-10 69.7 49 61.2
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.8e-10 69.7 48 64.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.8e-10 69.7 43 67.4
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.8e-10 69.7 43 67.4
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 3.0e-10 68.9 45 62.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 4.0e-10 68.6 60 55.0
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 5.2e-10 68.2 93 40.9
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.5e-09 66.6 43 69.8
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 1.5e-09 66.6 43 67.4
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 1.5e-09 66.6 45 66.7
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 7.5e-09 64.3 82 43.9
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 7.5e-09 64.3 71 50.7
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.7e-08 63.2 44 54.5
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 2.8e-08 62.4 49 61.2
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.9e-08 61.6 70 48.6
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 6.3e-08 61.2 76 40.8
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.1e-07 58.9 50 56.0
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.1e-07 58.9 50 56.0
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 1.2e-06 57.0 28 78.6
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 4.5e-06 55.1 28 75.0
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 4.5e-06 55.1 28 75.0


User provided reference genes

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