Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.6e-121 438.0 230 100.0
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 5.8e-116 421.0 230 95.7
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 7.0e-93 344.4 230 81.7
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.7e-70 270.0 231 68.4
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.7e-70 270.0 231 68.4
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 2.8e-70 269.2 232 68.5
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 1.4e-69 266.9 233 65.7
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 5.9e-68 261.5 232 64.2
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 5.9e-68 261.5 232 67.2
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.3e-67 260.4 183 78.7
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.3e-67 260.4 230 66.1
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.3e-67 260.4 230 65.7
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.7e-67 260.0 231 66.2
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 5.0e-67 258.5 230 65.7
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 8.6e-67 257.7 217 66.8
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 8.6e-67 257.7 231 64.9
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.9e-66 256.5 232 65.5
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.5e-66 256.1 204 70.1
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 4.2e-66 255.4 230 64.8
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 5.5e-66 255.0 183 76.5
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 5.5e-66 255.0 183 76.5
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 5.5e-66 255.0 183 76.5
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 9.5e-66 254.2 195 74.4
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 2.1e-65 253.1 222 64.9
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 3.6e-65 252.3 230 64.3
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 4.7e-65 251.9 186 75.8
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 6.1e-65 251.5 235 62.6
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 6.1e-65 251.5 219 68.5
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 8.0e-65 251.1 189 74.6
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 1.0e-64 250.8 183 77.0
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.0e-64 250.8 222 67.1
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.4e-64 250.4 199 70.4
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 3.0e-64 249.2 236 62.7
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 3.0e-64 249.2 224 64.7
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 4.0e-64 248.8 186 74.7
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 4.0e-64 248.8 193 73.6
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 6.8e-64 248.1 183 76.0
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.8e-64 248.1 199 69.3
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 6.8e-64 248.1 157 84.7
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 8.9e-64 247.7 230 63.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.5e-63 246.9 184 76.1
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 1.5e-63 246.9 230 62.6
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.5e-63 246.9 189 74.1
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.5e-63 246.9 225 64.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.5e-63 246.9 199 69.3
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 2.6e-63 246.1 220 65.9
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 3.4e-63 245.7 213 68.5
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.4e-63 245.7 213 68.5
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 5.7e-63 245.0 230 62.2
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.7e-63 245.0 217 67.3
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 9.8e-63 244.2 160 79.4
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 9.8e-63 244.2 230 64.3
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 2.2e-62 243.0 236 62.7
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 2.2e-62 243.0 225 64.0
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 3.7e-62 242.3 230 64.3
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 3.7e-62 242.3 221 65.6
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 8.3e-62 241.1 233 64.8
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 8.3e-62 241.1 230 61.7
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.1e-61 240.7 190 71.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 1.4e-61 240.4 215 66.5
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 1.4e-61 240.4 233 64.4
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.8e-61 240.0 226 63.7
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 1.8e-61 240.0 230 62.6
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 2.4e-61 239.6 183 72.7
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 3.1e-61 239.2 185 71.9
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.2e-60 237.3 207 67.6
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 1.6e-60 236.9 245 60.8
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 1.6e-60 236.9 150 83.3
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 4.5e-60 235.3 150 82.0
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 4.5e-60 235.3 211 64.5
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 7.8e-60 234.6 220 61.8
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 2.9e-59 232.6 219 63.0
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 5.0e-59 231.9 163 74.8
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 1.1e-58 230.7 164 76.2
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 2.5e-58 229.6 231 61.0
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 7.3e-58 228.0 232 61.6
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 6.1e-57 224.9 190 67.9
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 8.0e-57 224.6 233 59.7
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 5.2e-56 221.9 229 60.3
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 1.2e-55 220.7 224 58.0
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.5e-55 220.3 184 67.4
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 4.4e-55 218.8 231 59.3
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 5.8e-55 218.4 231 58.9
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 4.9e-54 215.3 212 63.7
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 6.0e-52 208.4 165 68.5
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 1.3e-51 207.2 231 57.1
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 2.5e-50 203.0 223 53.8
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.9e-46 189.5 209 56.5
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 7.0e-45 184.9 152 67.1
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 9.2e-45 184.5 156 66.7
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 2.3e-43 179.9 236 54.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 1.5e-42 177.2 108 83.3
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 5.2e-40 168.7 118 74.6
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 9.9e-39 164.5 107 82.2
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 2.9e-38 162.9 173 54.9
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 4.9e-38 162.2 182 53.3
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 1.1e-29 134.4 120 65.0
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 4.6e-28 129.0 82 84.1
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 3.0e-27 126.3 82 82.9
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 5.6e-26 122.1 80 76.2
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 9.0e-24 114.8 74 81.1
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 3.8e-22 109.4 87 65.5
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 3.8e-22 109.4 133 45.9
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 4.6e-20 102.4 102 59.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 6.9e-16 88.6 58 79.3
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 4.5e-15 85.9 111 40.5
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 5.1e-11 72.4 48 77.1
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 6.7e-11 72.0 47 78.7
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 8.7e-11 71.6 102 39.2
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 7.4e-10 68.6 111 41.4
AagrBONN_evm.TU.Sc2ySwM_117.1655 Anthoceros agrestis HOM05D007184 ORTHO05D008987 1.7e-06 57.4 89 39.3
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-06 57.4 37 75.7
Sc03g0008980 Simmondsia chinensis HOM05D007184 ORTHO05D008987 6.4e-06 55.5 43 65.1


User provided reference genes

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