Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-105 386.3 190 100.0
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-105 386.3 190 100.0
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 1.3e-97 359.8 193 92.2
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 4.2e-96 354.8 193 90.2
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 4.0e-94 348.2 193 92.2
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 5.7e-93 344.4 193 87.6
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 4.1e-91 338.2 193 83.9
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 7.0e-91 337.4 190 86.8
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.7e-90 335.5 193 84.5
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 4.6e-90 334.7 193 83.9
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 5.9e-90 334.3 193 83.4
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 5.9e-90 334.3 194 84.5
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.0e-89 333.6 193 82.9
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.0e-89 333.6 190 85.3
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.0e-89 333.6 193 83.4
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.3e-89 333.2 193 83.9
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 81.9
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 82.9
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 2.9e-89 332.0 193 83.4
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.9e-89 331.6 193 82.9
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 3.9e-89 331.6 193 82.9
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.9e-89 331.6 192 82.8
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 3.9e-89 331.6 193 82.4
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 5.0e-89 331.3 193 82.9
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 5.0e-89 331.3 193 82.9
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 5.0e-89 331.3 193 83.4
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 6.6e-89 330.9 190 84.2
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 82.4
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 82.4
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 82.4
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 83.4
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 82.4
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 82.4
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 8.6e-89 330.5 193 81.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 81.9
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 81.9
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 82.9
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 82.9
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.5e-88 329.7 193 82.4
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.5e-88 329.7 193 81.9
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.5e-88 329.7 193 80.8
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 82.9
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 82.9
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 3.3e-88 328.6 193 82.4
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 4.3e-88 328.2 191 82.2
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 4.3e-88 328.2 190 83.2
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 4.3e-88 328.2 193 82.4
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 5.6e-88 327.8 190 82.6
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 5.6e-88 327.8 190 83.2
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 5.6e-88 327.8 193 81.9
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 7.3e-88 327.4 193 81.3
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 7.3e-88 327.4 190 83.7
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 9.5e-88 327.0 193 82.4
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 9.5e-88 327.0 193 82.4
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 1.6e-87 326.2 190 84.2
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.6e-87 326.2 193 81.3
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.1e-87 325.9 190 82.1
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.1e-87 325.9 190 82.1
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 2.1e-87 325.9 190 83.2
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 2.1e-87 325.9 190 83.2
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 4.7e-87 324.7 193 81.3
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 6.1e-87 324.3 193 81.3
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 6.1e-87 324.3 193 81.9
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 3.1e-86 322.0 190 82.6
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.8e-86 320.9 190 81.6
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 8.9e-86 320.5 219 72.1
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 1.2e-85 320.1 194 80.9
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 2.0e-85 319.3 193 78.2
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 3.4e-85 318.5 193 79.3
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 5.8e-85 317.8 193 79.8
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 7.5e-85 317.4 182 84.1
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 9.8e-85 317.0 190 80.0
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.7e-84 316.2 197 80.2
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 2.2e-84 315.8 193 77.7
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 2.2e-84 315.8 193 79.8
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.9e-84 315.5 193 79.8
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 1.4e-83 313.2 190 80.0
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.9e-83 312.8 232 68.5
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.4e-83 312.4 193 80.3
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 3.2e-83 312.0 247 66.0
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 1.6e-82 309.7 193 80.3
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 3.0e-81 305.4 193 77.7
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.0e-81 304.7 210 73.3
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 8.6e-81 303.9 199 76.4
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.1e-80 303.5 190 77.9
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 9.5e-80 300.4 187 79.1
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 6.2e-79 297.7 177 79.7
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 6.8e-78 294.3 192 74.0
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 2.0e-77 292.7 164 86.0
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.4e-75 286.6 172 82.0
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 1.9e-75 286.2 170 83.5
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 3.2e-75 285.4 164 80.5
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 7.1e-75 284.3 174 82.2
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 7.1e-75 284.3 177 76.3
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.6e-72 274.6 167 81.4
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 3.6e-71 271.9 194 69.6
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 1.4e-70 270.0 197 70.1
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 4.0e-70 268.5 159 81.8
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.7e-66 255.8 133 90.2
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 3.3e-64 248.8 157 80.3
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.3e-64 248.4 158 79.7
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.7e-63 245.0 156 78.2
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.9e-60 235.0 227 58.1
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 6.4e-60 234.6 139 82.7
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.9e-59 233.0 185 63.8
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 9.3e-59 230.7 164 70.7
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 9.3e-59 230.7 193 62.7
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 1.6e-55 219.9 170 61.2
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 5.3e-54 214.9 170 60.6
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 7.6e-53 211.1 112 86.6
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.2e-52 209.5 169 60.4
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.4e-51 206.8 133 78.2
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 3.2e-51 205.7 190 60.0
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 6.6e-49 198.0 179 53.6
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.8e-46 189.9 166 61.4
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.2e-44 183.0 166 55.4
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 4.3e-40 168.7 110 71.8
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.5e-37 160.2 144 52.1
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 4.9e-36 155.2 144 51.4
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 1.8e-33 146.7 112 58.9
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.1e-30 135.6 132 56.1
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.4e-24 114.8 129 50.4
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.3e-23 114.0 167 43.1
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-23 112.1 135 50.4
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.7e-21 104.8 216 38.0
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 1.7e-20 103.6 126 49.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-20 103.6 65 75.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.5e-19 98.6 120 48.3
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 4.6e-18 95.5 53 86.8
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 2.3e-17 93.2 53 86.8
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.7e-16 88.6 132 42.4
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.2e-12 76.6 54 66.7
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 1.4e-11 73.9 50 70.0
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 2.2e-07 60.1 32 75.0
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.1e-06 57.8 103 37.9


User provided reference genes

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