Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020482 Chenopodium quinoa HOM05D001371 ORTHO05D001319 4.2e-43 177.6 85 100.0
AUR62015727 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.1e-19 99.8 51 88.2
AUR62015730 Chenopodium quinoa HOM05D001371 ORTHO05D001319 5.3e-14 80.9 51 68.6
Ah.01g009220 Amaranthus hybridus HOM05D001371 ORTHO05D001319 1.3e-12 76.3 53 64.2
AUR62020479 Chenopodium quinoa HOM05D001371 ORTHO05D001319 2.9e-12 75.1 51 64.7
EL10Ac4g07860 Beta vulgaris HOM05D001371 ORTHO05D001319 1.6e-10 69.3 51 58.8
AUR62020488 Chenopodium quinoa HOM05D001371 ORTHO05D001319 4.6e-10 67.8 51 64.7
Haze_09654 Corylus avellana HOM05D001371 ORTHO05D001319 4.6e-10 67.8 51 62.7
Hma1.2p1_1222F.1_g268280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 6.1e-10 67.4 51 60.8
Hma1.2p1_0673F.1_g201150 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.4e-09 66.2 51 58.8
GSVIVG01037611001 Vitis vinifera HOM05D001371 ORTHO05D001319 1.4e-09 66.2 51 62.7
Nn1g03577 Nelumbo nucifera HOM05D001371 ORTHO05D001319 3.0e-09 65.1 51 56.9
EL10Ac4g07856 Beta vulgaris HOM05D001371 ORTHO05D001319 3.9e-09 64.7 51 62.7
TAR624G0374 Trochodendron aralioides HOM05D001371 ORTHO05D001319 3.9e-09 64.7 48 62.5
Hma1.2p1_1222F.1_g268225 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 6.7e-09 63.9 51 60.8
Nitab4.5_0000397g0310 Nicotiana tabacum HOM05D001371 ORTHO05D001319 6.7e-09 63.9 48 60.4
Sopen07g032600 Solanum pennellii HOM05D001371 ORTHO05D001319 8.8e-09 63.5 48 60.4
AUR62020483 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.1e-08 63.2 51 58.8
Lj1C870G3 Lonicera japonica HOM05D000134 ORTHO05D001319 1.1e-08 63.2 48 60.4
Sc03g0008760 Simmondsia chinensis HOM05D001371 ORTHO05D001319 1.1e-08 63.2 48 60.4
Dinv22278 Davidia involucrata HOM05D001371 ORTHO05D001319 1.5e-08 62.8 51 56.9
QL08p011782 Quercus lobata HOM05D001371 ORTHO05D001319 1.5e-08 62.8 51 56.9
VMungo0540G0870 Vigna mungo HOM05D001371 ORTHO05D001319 1.5e-08 62.8 51 54.9
Nitab4.5_0001604g0020 Nicotiana tabacum HOM05D001371 ORTHO05D001319 1.9e-08 62.4 48 58.3
Solyc07g064360.3 Solanum lycopersicum HOM05D001371 ORTHO05D001319 1.9e-08 62.4 79 44.3
Solyc07g064400.2 Solanum lycopersicum HOM05D001371 ORTHO05D001319 1.9e-08 62.4 48 60.4
Nitab4.5_0000397g0390 Nicotiana tabacum HOM05D001371 ORTHO05D001319 2.5e-08 62.0 48 58.3
Nitab4.5_0007952g0010 Nicotiana tabacum HOM05D001371 ORTHO05D001319 2.5e-08 62.0 48 58.3
Hma1.2p1_1222F.1_g268270 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 3.3e-08 61.6 51 58.8
Lj1A870T72 Lonicera japonica HOM05D001371 ORTHO05D001319 3.3e-08 61.6 46 60.9
Rhsim06G0215600 Rhododendron simsii HOM05D001371 ORTHO05D001319 3.3e-08 61.6 50 62.0
Solyc07g064370.1 Solanum lycopersicum HOM05D001371 ORTHO05D001319 3.3e-08 61.6 51 54.9
vmacro11737 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 4.3e-08 61.2 51 60.8
Rhsim06G0215500 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.7e-08 60.8 51 60.8
TAR624G0556 Trochodendron aralioides HOM05D001371 ORTHO05D001319 5.7e-08 60.8 48 60.4
Rhsim06G0215800 Rhododendron simsii HOM05D001371 ORTHO05D001319 7.4e-08 60.5 51 58.8
Psat5g179720 Pisum sativum HOM05D001371 ORTHO05D001319 1.3e-07 59.7 51 54.9
CANSAT56G1392 Cannabis sativa HOM05D001371 ORTHO05D001319 1.7e-07 59.3 51 56.9
Nitab4.5_0001604g0030 Nicotiana tabacum HOM05D001371 ORTHO05D001319 1.7e-07 59.3 51 52.9
Sopen07g032530 Solanum pennellii HOM05D001371 ORTHO05D001319 1.7e-07 59.3 51 52.9
PGSC0003DMG400022226 Solanum tuberosum HOM05D001371 ORTHO05D001319 1.7e-07 59.3 48 58.3
AT1G50830 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.2e-07 58.9 48 56.2
arahy.Tifrunner.gnm1.ann1.UWY4YC Arachis hypogaea HOM05D001371 ORTHO05D001319 2.2e-07 58.9 53 56.6
AUR62015728 Chenopodium quinoa HOM05D001371 ORTHO05D001319 2.2e-07 58.9 51 58.8
Sopen07g032520 Solanum pennellii HOM05D001371 ORTHO05D001319 2.8e-07 58.5 48 56.2
PGSC0003DMG400013917 Solanum tuberosum HOM05D001371 ORTHO05D001319 2.8e-07 58.5 79 41.8
AT5G18510 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 3.7e-07 58.2 71 46.5
AL6G29780 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 4.8e-07 57.8 48 54.2
Nitab4.5_0000117g0090 Nicotiana tabacum HOM05D001371 ORTHO05D001319 4.8e-07 57.8 51 49.0
Rhsim06G0215700 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.8e-07 57.8 51 54.9
arahy.Tifrunner.gnm1.ann1.Y9R7EH Arachis hypogaea HOM05D001371 ORTHO05D001319 6.3e-07 57.4 73 45.2
BcaB07g33607 Brassica carinata HOM05D001371 ORTHO05D001319 8.2e-07 57.0 51 54.9
Dinv22277 Davidia involucrata HOM05D001371 ORTHO05D001319 8.2e-07 57.0 49 57.1
Peaxi162Scf00094g01122 Petunia axillaris HOM05D001371 ORTHO05D001319 8.2e-07 57.0 52 50.0
ECA236G3969 Erigeron canadensis HOM05D001371 ORTHO05D001319 1.1e-06 56.6 51 54.9
Hma1.2p1_1356F.1_g277900 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.1e-06 56.6 48 47.9
Peaxi162Scf00450g00737 Petunia axillaris HOM05D001371 ORTHO05D001319 1.1e-06 56.6 50 60.0
Hma1.2p1_1271F.1_g271770 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.4e-06 56.2 47 48.9
Peaxi162Scf00450g00078 Petunia axillaris HOM05D001371 ORTHO05D001319 1.4e-06 56.2 48 54.2
Duzib132G0682 Durio zibethinus HOM05D001371 ORTHO05D001319 1.8e-06 55.8 51 54.9
Lj6g0008848 Lotus japonicus HOM05D001371 ORTHO05D001319 1.8e-06 55.8 51 49.0
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.8e-06 55.8 51 54.9
Ah.12g058160 Amaranthus hybridus HOM05D001371 ORTHO05D001319 2.4e-06 55.5 51 45.1
Nitab4.5_0000397g0330 Nicotiana tabacum HOM05D001371 ORTHO05D001319 2.4e-06 55.5 51 51.0
Psat2g014080 Pisum sativum HOM05D001371 ORTHO05D001319 2.4e-06 55.5 41 63.4
Psat5g180080 Pisum sativum HOM05D001371 ORTHO05D001319 2.4e-06 55.5 51 51.0
BcaB07g33535 Brassica carinata HOM05D001371 ORTHO05D001319 3.1e-06 55.1 51 54.9
Duzib052G0957 Durio zibethinus HOM05D001371 ORTHO05D001319 3.1e-06 55.1 51 56.9
vmacro00629 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 3.1e-06 55.1 52 53.8
COL.COLO4_10613 Corchorus olitorius HOM05D001371 ORTHO05D001319 4.1e-06 54.7 51 52.9
Thhalv10012297m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 4.1e-06 54.7 48 50.0
FvH4_3g22280 Fragaria vesca HOM05D001371 ORTHO05D001319 4.1e-06 54.7 62 53.2
FvH4_3g22281 Fragaria vesca HOM05D001371 ORTHO05D001319 4.1e-06 54.7 51 54.9
QL08p011658 Quercus lobata HOM05D001371 ORTHO05D001319 4.1e-06 54.7 51 52.9
Actinidia09910 Actinidia chinensis HOM05D001371 ORTHO05D001319 5.3e-06 54.3 51 51.0
Hma1.2p1_0062F.1_g034280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 5.3e-06 54.3 58 41.4
Lj8A168T103 Lonicera japonica HOM05D001371 ORTHO05D001319 5.3e-06 54.3 51 45.1
Peaxi162Scf00425g00006 Petunia axillaris HOM05D001371 ORTHO05D001319 5.3e-06 54.3 50 48.0
Peaxi162Scf00575g00094 Petunia axillaris HOM05D001371 ORTHO05D001319 5.3e-06 54.3 50 48.0
RcHm_v2.0_Chr5g0038801 Rosa chinensis HOM05D001371 ORTHO05D001319 5.3e-06 54.3 51 52.9
Sp1g38170 Schrenkiella parvula HOM05D001371 ORTHO05D001319 5.3e-06 54.3 50 48.0
BcaC02g11669 Brassica carinata HOM05D001371 ORTHO05D001319 6.9e-06 53.9 78 37.2
BolC4t22904H Brassica oleracea HOM05D001371 ORTHO05D001319 6.9e-06 53.9 78 37.2
CARHR290670 Cardamine hirsuta HOM05D001371 ORTHO05D001319 6.9e-06 53.9 41 58.5
Duzib248G0853 Durio zibethinus HOM05D001371 ORTHO05D001319 6.9e-06 53.9 51 54.9
Gorai.005G249100 Gossypium raimondii HOM05D001371 ORTHO05D001319 6.9e-06 53.9 51 52.9
A05p10170 Brassica napus HOM05D001371 ORTHO05D001319 9.1e-06 53.5 71 40.8
BraA05t19958Z Brassica rapa HOM05D001371 ORTHO05D001319 9.1e-06 53.5 71 40.8
FAN16G2046 Fragaria x ananassa HOM05D001371 ORTHO05D001319 9.1e-06 53.5 51 52.9
Rhsim09G0022300 Rhododendron simsii HOM05D001371 ORTHO05D001319 9.1e-06 53.5 52 50.0
RhsimUnG0223800 Rhododendron simsii HOM05D001371 ORTHO05D001319 9.1e-06 53.5 52 50.0
TAR624G0816 Trochodendron aralioides HOM05D001371 ORTHO05D001319 9.1e-06 53.5 41 61.0


User provided reference genes

Program Settings