Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.3e-57 225.3 113 100.0
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 8.2e-55 216.9 113 96.5
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 1.0e-25 120.2 110 58.2
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.4e-22 107.8 114 51.8
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 5.0e-20 101.3 108 51.9
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 4.3e-19 98.2 109 49.5
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.4e-16 88.2 114 45.6
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.3e-15 86.7 114 44.7
AUR62015773 Chenopodium quinoa HOM05D003074 ORTHO05D002434 8.3e-15 84.0 92 51.1
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.9e-14 82.8 120 44.2
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.0e-14 80.9 114 46.5
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 2.0e-13 79.3 111 44.1
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.5e-13 78.6 122 42.6
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.5e-13 78.6 130 41.5
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.3e-12 76.6 121 40.5
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 3.0e-12 75.5 124 41.1
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 5.0e-12 74.7 127 40.2
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 5.0e-12 74.7 115 41.7
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 1.5e-11 73.2 125 41.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 3.3e-11 72.0 127 44.1
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 4.3e-11 71.6 125 39.2
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 5.6e-11 71.2 121 41.3
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 9.5e-11 70.5 124 41.1
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 9.5e-11 70.5 111 41.4
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 9.5e-11 70.5 117 40.2
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.1e-10 69.3 118 35.6
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.1e-10 69.3 118 36.4
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 3.6e-10 68.6 109 41.3
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 4.7e-10 68.2 112 41.1
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 4.7e-10 68.2 120 36.7
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 6.2e-10 67.8 136 36.0
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 6.2e-10 67.8 126 35.7
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 8.1e-10 67.4 120 37.5
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.1e-09 67.0 139 35.3
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-09 67.0 131 36.6
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.1e-09 67.0 116 37.9
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.1e-09 67.0 128 35.9
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-09 67.0 82 53.7
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.4e-09 66.6 92 45.7
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.8e-09 66.2 120 36.7
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.8e-09 66.2 122 41.0
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.8e-09 66.2 119 39.5
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.3e-09 65.9 118 37.3
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 3.1e-09 65.5 111 34.2
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.0e-09 65.1 127 38.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 5.2e-09 64.7 119 40.3
Aqoxy1G02177 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 6.8e-09 64.3 119 34.5
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 6.8e-09 64.3 123 35.8
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 6.8e-09 64.3 125 36.8
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.5e-08 63.2 115 39.1
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.0e-08 62.8 116 38.8
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.6e-08 62.4 120 36.7
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.6e-08 62.4 120 36.7
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.4e-08 62.0 116 35.3
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.4e-08 62.0 120 35.0
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.4e-08 61.6 122 36.9
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.8e-08 61.2 124 37.9
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 5.8e-08 61.2 127 34.6
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 7.5e-08 60.8 117 35.0
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 9.9e-08 60.5 139 37.4
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 9.9e-08 60.5 102 41.2
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.3e-07 60.1 120 35.8
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.3e-07 60.1 113 35.4
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.3e-07 60.1 94 42.6
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.3e-07 60.1 124 35.5
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 116 33.6
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 1.7e-07 59.7 139 33.1
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 124 37.9
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 124 37.9
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 115 37.4
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.9e-07 58.9 120 37.5
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.9e-07 58.2 139 32.4
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 6.4e-07 57.8 124 33.9
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.4e-07 57.8 139 32.4
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.4e-07 57.8 139 32.4
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 6.4e-07 57.8 127 34.6
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 8.3e-07 57.4 114 36.0
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.4e-06 56.6 113 38.9
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.9e-06 56.2 111 33.3
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.9e-06 56.2 125 32.0
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.9e-06 56.2 123 29.3
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.2e-06 55.5 131 30.5
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.2e-06 55.5 113 32.7
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.2e-06 55.5 140 32.9
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.2e-06 55.5 123 30.1
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 4.1e-06 55.1 96 38.5
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 4.1e-06 55.1 117 37.6
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.1e-06 55.1 110 32.7
Nitab4.5_0009398g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 4.1e-06 55.1 115 33.0
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.1e-06 55.1 113 38.9
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.4e-06 54.7 116 37.9
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 5.4e-06 54.7 110 33.6
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 7.1e-06 54.3 101 35.6
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 9.2e-06 53.9 143 33.6
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 9.2e-06 53.9 112 35.7


User provided reference genes

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