Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.5e-173 612.8 319 100.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 5.5e-157 557.8 297 98.0
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 3.1e-139 498.8 305 81.6
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 4.1e-136 488.4 318 75.2
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.7e-134 483.0 316 73.4
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.1e-133 480.3 317 74.8
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.1e-133 480.3 317 74.4
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.5e-133 479.9 316 81.3
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.5e-133 479.9 316 75.3
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 3.3e-133 478.8 316 75.3
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.6e-133 478.0 317 74.1
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 9.5e-133 477.2 316 73.7
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.2e-132 476.9 316 72.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.6e-132 475.3 316 75.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.1e-131 473.8 316 73.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.0e-131 471.9 318 74.5
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 5.2e-131 471.5 319 72.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.2e-131 471.5 316 73.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 2.0e-130 469.5 315 72.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 7.6e-130 467.6 316 73.1
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 4.9e-129 464.9 318 72.0
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.3e-129 464.2 316 72.5
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.1e-128 463.8 314 72.9
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.1e-128 463.8 316 73.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 3.2e-128 462.2 318 71.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.2e-128 462.2 316 72.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 5.4e-128 461.5 314 73.9
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.2e-127 460.3 316 72.8
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.2e-127 460.3 314 73.9
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 6.0e-127 458.0 326 70.6
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.0e-126 457.2 314 74.2
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.7e-126 456.4 316 71.5
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.7e-126 456.4 320 70.9
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.0e-126 455.7 316 69.9
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 6.6e-126 454.5 318 71.7
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.5e-125 452.6 316 70.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 2.5e-125 452.6 316 71.2
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.3e-125 451.8 316 71.8
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 4.3e-125 451.8 317 69.7
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 5.6e-125 451.4 319 71.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-124 449.9 316 70.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.6e-124 448.7 315 70.5
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.6e-124 448.7 316 70.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.4e-123 446.8 323 70.0
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.8e-123 446.4 318 69.2
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.4e-123 446.0 318 68.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.1e-123 445.7 315 69.5
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.8e-123 444.5 315 71.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.2e-122 443.7 315 69.2
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.5e-122 443.4 313 69.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.5e-122 443.4 313 69.3
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.6e-122 442.6 312 72.4
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.4e-122 441.8 315 69.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.6e-122 441.0 315 70.5
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.7e-121 439.9 315 68.3
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.2e-121 439.5 316 70.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 3.8e-121 438.7 302 70.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 8.4e-121 437.6 315 68.9
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 8.4e-121 437.6 302 72.2
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.4e-120 436.8 302 71.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 3.2e-120 435.6 319 67.7
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.2e-120 435.3 316 68.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 7.1e-120 434.5 314 68.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.8e-119 431.0 304 68.1
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-118 429.9 304 67.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.7e-118 429.9 316 70.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.5e-117 426.8 338 66.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.5e-117 426.0 301 71.4
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 4.3e-117 425.2 359 61.8
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.3e-117 425.2 305 67.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.8e-115 419.9 314 68.2
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.4e-115 419.5 316 66.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 5.3e-115 418.3 301 69.4
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.5e-114 416.8 318 68.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 8.4e-113 411.0 315 62.5
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 8.7e-110 401.0 316 63.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.3e-109 398.7 271 73.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 5.6e-109 398.3 316 64.9
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.1e-108 396.4 304 65.1
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.4e-107 393.7 285 70.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 5.4e-104 381.7 337 60.8
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.3e-102 377.1 296 63.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 3.0e-102 375.9 313 62.6
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.0e-98 363.2 314 61.8
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.7e-95 352.8 270 69.6
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.7e-95 352.8 270 69.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 6.0e-95 351.7 258 68.2
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.1e-93 347.4 247 69.2
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-88 330.9 232 68.5
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.6e-84 317.0 256 65.6
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 9.0e-83 311.2 320 50.0
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.5e-82 308.9 213 72.8
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.5e-81 305.1 313 49.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.6e-79 298.9 315 50.2
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.4e-78 297.4 311 50.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.9e-78 295.8 313 49.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.0e-73 281.2 193 71.0
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.7e-73 280.4 216 66.2
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.5e-72 276.6 181 73.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.7e-68 263.8 232 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.2e-65 253.4 303 42.2
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.1e-64 251.1 330 46.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 5.2e-62 242.3 268 48.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.2e-55 221.1 343 39.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 8.3e-52 208.4 144 66.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.0e-46 189.9 228 49.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.6e-42 177.6 129 64.3
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 4.5e-42 176.0 127 64.6
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 2.7e-34 150.2 248 36.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.5e-29 132.1 103 65.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 6.6e-25 119.0 86 65.1
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 9.5e-24 115.2 93 60.2
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 3.4e-21 106.7 68 79.4
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 9.8e-21 105.1 187 36.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.3e-08 63.5 71 47.9
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.6e-07 61.2 44 59.1
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 1.8e-06 57.8 43 72.1


User provided reference genes

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