Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 4.8e-213 744.2 369 100.0
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 3.0e-162 575.5 359 79.1
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.6e-161 571.2 299 94.6
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 3.4e-150 535.4 356 71.6
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 5.3e-143 511.5 352 71.3
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 1.2e-123 447.2 358 60.6
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.6e-123 446.8 356 60.1
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 7.9e-123 444.5 358 60.3
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.4e-122 443.7 355 60.3
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 3.0e-122 442.6 355 60.3
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 3.9e-122 442.2 358 58.4
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 5.7e-121 438.3 361 59.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.3e-120 437.2 355 59.2
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 8.2e-120 434.5 356 58.4
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.1e-119 434.1 356 59.8
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 5.3e-119 431.8 357 58.8
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 6.9e-119 431.4 355 58.9
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 9.1e-119 431.0 354 59.3
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 5.9e-118 428.3 358 58.9
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 5.9e-118 428.3 351 59.5
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 1.0e-117 427.6 355 58.3
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.3e-117 427.2 355 60.8
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 5.0e-117 425.2 359 57.4
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 5.0e-117 425.2 360 57.8
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 1.9e-116 423.3 359 57.1
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 2.5e-116 422.9 361 57.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.2e-115 420.6 358 55.9
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 1.8e-114 416.8 331 60.1
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 3.9e-114 415.6 361 57.1
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 3.3e-113 412.5 367 56.7
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 4.4e-113 412.1 357 54.9
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 7.4e-113 411.4 355 56.6
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 7.4e-113 411.4 355 55.8
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 2.2e-112 409.8 358 55.6
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 3.7e-112 409.1 356 55.1
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 9.1e-111 404.4 357 56.0
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 7.7e-110 401.4 360 54.7
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 7.7e-110 401.4 352 55.7
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 2.2e-109 399.8 363 54.5
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 2.9e-109 399.4 355 56.1
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 2.9e-109 399.4 362 55.2
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 3.8e-109 399.1 362 55.0
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.9e-108 396.7 333 57.1
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 2.5e-108 396.4 355 54.4
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 3.2e-108 396.0 361 52.9
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 4.2e-108 395.6 356 54.8
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 5.5e-108 395.2 352 54.5
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 7.2e-108 394.8 355 55.2
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.1e-107 393.3 362 54.1
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 2.1e-107 393.3 355 55.5
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.0e-106 391.0 351 53.3
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 6.7e-106 388.3 326 57.4
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 2.6e-105 386.3 354 53.4
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 4.4e-105 385.6 360 52.8
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 1.3e-104 384.0 354 53.1
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 3.7e-104 382.5 361 53.5
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 8.2e-104 381.3 377 51.5
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 7.0e-103 378.3 361 52.6
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 7.0e-103 378.3 359 53.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.6e-102 377.1 356 54.2
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.0e-102 376.7 355 52.1
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 3.5e-102 375.9 357 52.7
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.7e-101 373.6 361 52.1
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.5e-101 371.7 359 51.3
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 6.5e-101 371.7 357 52.1
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 6.5e-101 371.7 356 52.8
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 8.5e-101 371.3 352 52.6
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.1e-100 370.9 358 52.0
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 4.7e-99 365.5 359 51.0
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 6.1e-99 365.2 359 51.3
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.8e-98 363.6 356 50.0
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 3.0e-98 362.8 360 50.6
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 6.8e-98 361.7 333 54.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.5e-97 360.5 353 51.0
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.7e-96 355.9 282 61.0
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 4.1e-95 352.4 352 51.1
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 7.0e-95 351.7 283 57.2
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 1.2e-94 350.9 311 55.3
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.3e-93 347.4 314 54.1
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 1.6e-91 340.5 388 45.1
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 6.1e-91 338.6 312 53.2
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.0e-90 337.8 283 59.0
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 2.8e-88 329.7 266 60.5
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 4.8e-88 328.9 311 53.1
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 3.5e-86 322.8 353 48.4
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 7.2e-84 315.1 293 53.9
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.5e-81 307.4 291 54.0
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 7.5e-81 305.1 352 45.5
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 7.0e-79 298.5 284 51.1
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 3.5e-78 296.2 241 59.3
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.3e-77 294.3 268 54.9
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 9.5e-76 288.1 263 55.5
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.6e-75 287.3 370 43.8
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.9e-72 276.6 341 44.3
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 1.7e-53 214.2 188 57.4
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.5e-52 211.1 207 55.1
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 6.2e-51 205.7 198 49.5
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.4e-48 195.3 282 42.9
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 3.0e-45 186.8 243 42.4
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 3.3e-44 183.3 202 47.5
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 1.6e-43 181.0 366 33.6
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 6.9e-42 175.6 281 38.1
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 4.6e-38 162.9 348 33.3
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 3.9e-29 133.3 120 55.8
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 3.0e-21 107.1 134 40.3
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 5.8e-17 92.8 116 41.4
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.3e-16 91.7 65 64.6
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 8.2e-11 72.4 89 39.3
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 1.1e-10 72.0 101 41.6
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 1.1e-07 62.0 110 33.6
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 1.4e-07 61.6 70 42.9


User provided reference genes

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