Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 0.0e+00 1364.4 670 100.0
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 3.5e-278 961.4 614 80.3
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 4.0e-189 665.6 672 56.5
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.6e-174 615.9 715 49.9
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.4e-172 609.4 683 52.3
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.9e-171 605.5 696 49.4
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.1e-170 602.4 683 52.1
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 4.7e-166 589.0 686 49.9
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 5.8e-164 582.0 673 50.2
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 4.9e-163 578.9 679 50.1
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 1.1e-162 577.8 687 49.5
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 2.4e-162 576.6 690 50.7
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 9.2e-162 574.7 684 49.3
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 2.7e-161 573.2 680 49.3
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.7e-161 573.2 682 50.1
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 4.3e-159 565.8 689 49.5
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 4.3e-159 565.8 686 48.7
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 4.3e-159 565.8 676 49.1
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 7.3e-159 565.1 688 49.1
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 9.5e-159 564.7 669 49.0
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 4.7e-158 562.4 687 49.9
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 1.1e-157 561.2 693 47.2
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.8e-157 560.5 684 48.1
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 6.8e-157 558.5 700 49.3
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 8.9e-157 558.1 676 49.0
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 8.9e-157 558.1 680 49.6
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.2e-156 557.8 687 48.6
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-156 557.4 672 48.7
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 2.0e-156 557.0 692 47.8
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 3.4e-156 556.2 690 49.4
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.9e-156 554.7 678 47.9
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 4.9e-155 552.4 672 48.2
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.4e-155 552.0 680 47.6
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 8.4e-155 551.6 690 47.0
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.4e-154 550.1 680 49.3
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 4.1e-154 549.3 671 48.9
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 4.1e-154 549.3 678 47.8
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 4.1e-154 549.3 679 47.6
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 9.2e-154 548.1 678 47.5
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-153 547.7 680 48.5
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 1.6e-153 547.4 674 48.5
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.6e-153 547.4 681 47.1
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 2.1e-153 547.0 682 47.1
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 2.7e-153 546.6 679 47.3
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.7e-153 546.6 680 47.4
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 3.5e-153 546.2 680 47.9
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 3.5e-153 546.2 669 48.6
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 3.5e-153 546.2 674 48.5
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 3.5e-153 546.2 672 49.3
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.3e-152 544.3 674 48.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 2.3e-152 543.5 675 48.0
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 5.1e-152 542.3 685 48.9
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 6.6e-152 542.0 681 48.3
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 8.6e-152 541.6 688 46.9
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 8.6e-152 541.6 683 47.6
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.1e-151 541.2 675 47.7
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.5e-151 540.8 688 46.9
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 1.5e-151 540.8 683 47.4
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.9e-151 540.4 681 47.4
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 5.6e-151 538.9 687 46.3
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 7.3e-151 538.5 679 47.7
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 7.3e-151 538.5 680 47.1
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 1.2e-150 537.7 673 47.7
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 2.8e-150 536.6 677 47.1
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 3.6e-150 536.2 688 46.7
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 4.7e-150 535.8 686 47.1
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.1e-150 535.0 674 47.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.1e-149 534.6 689 47.3
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.8e-149 533.9 681 47.3
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 4.0e-149 532.7 682 47.4
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 6.8e-149 531.9 676 46.7
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.2e-148 531.2 681 47.4
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 3.4e-148 529.6 677 46.1
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 5.8e-148 528.9 681 46.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 9.9e-148 528.1 680 47.2
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.7e-147 527.3 680 46.9
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.7e-147 527.3 680 47.2
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 2.2e-147 526.9 681 45.4
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 2.9e-147 526.6 698 45.8
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-146 524.2 685 46.0
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 3.2e-146 523.1 668 46.7
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 5.4e-146 522.3 682 46.2
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.7e-145 520.0 679 46.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 3.5e-145 519.6 678 45.6
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 6.0e-145 518.8 683 46.0
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.0e-145 518.8 684 45.9
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 2.3e-144 516.9 686 45.6
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 1.1e-143 514.6 718 44.4
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 2.5e-143 513.5 683 45.5
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 2.5e-143 513.5 691 46.0
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 4.3e-143 512.7 688 46.7
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 4.3e-143 512.7 674 46.0
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.6e-142 510.8 621 48.3
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 2.1e-142 510.4 680 46.5
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.1e-142 508.4 688 45.2
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.8e-141 507.3 684 45.3
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.8e-141 507.3 680 45.1
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 4.0e-141 506.1 692 44.5
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 1.2e-140 504.6 678 44.0
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.0e-140 503.8 680 46.0
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 3.4e-140 503.1 670 46.6
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.4e-140 503.1 674 44.2
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 7.6e-140 501.9 682 44.6
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-139 501.1 659 45.8
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 8.4e-139 498.4 681 44.5
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.1e-138 498.0 677 45.8
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.9e-138 497.3 683 45.5
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 7.1e-138 495.4 736 43.9
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 9.3e-138 495.0 674 46.3
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 3.5e-137 493.0 675 44.0
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 3.9e-136 489.6 680 45.1
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.6e-136 488.8 680 44.1
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 2.5e-135 486.9 670 44.5
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.3e-134 484.6 679 44.3
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 2.1e-134 483.8 691 43.0
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.8e-134 482.6 682 44.6
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.4e-133 480.3 703 41.5
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.9e-131 473.4 687 43.4
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 8.7e-128 461.8 677 42.5
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.1e-125 454.9 690 43.3
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 5.3e-125 452.6 619 44.9
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.8e-123 446.4 622 44.1
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 3.0e-120 436.8 620 43.7
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.9e-119 434.1 504 51.0
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 2.1e-118 430.6 660 44.1
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 2.8e-118 430.3 676 41.0
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 3.7e-118 429.9 675 42.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 3.4e-116 423.3 498 49.2
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 3.4e-116 423.3 494 48.8
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 2.3e-112 410.6 497 49.3
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 2.4e-109 400.6 674 42.1
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 2.5e-103 380.6 553 44.3
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 5.3e-101 372.9 553 43.0
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 4.5e-100 369.8 527 45.0
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.6e-92 344.7 701 36.5
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 5.9e-92 342.8 465 46.5
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.0e-91 342.0 289 63.7
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-90 337.4 646 36.8
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.6e-89 334.7 706 35.7
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 2.0e-87 327.8 534 40.6
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.0e-83 313.2 301 56.8
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.0e-80 305.4 459 42.5
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 1.4e-80 305.1 712 34.7
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 2.6e-79 300.8 710 34.6
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 8.3e-78 295.8 508 39.0
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 1.1e-77 295.4 287 54.4
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.1e-77 295.4 240 65.8
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.7e-75 288.1 584 37.3
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 2.2e-75 287.7 800 32.1
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.2e-74 283.5 280 57.1
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 1.2e-63 248.8 661 31.0
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 5.0e-59 233.4 447 36.5
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.8e-57 227.6 306 43.1
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 3.1e-56 224.2 294 43.5
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-54 218.8 241 51.5
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 2.9e-54 217.6 634 30.9
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 2.9e-46 191.0 333 36.6
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 1.2e-44 185.7 405 35.6
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 1.5e-39 168.7 142 62.7
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 3.2e-37 161.0 220 45.0
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.3e-35 154.8 727 25.4
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 5.6e-34 150.2 151 51.0
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 2.5e-26 124.8 229 34.9
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.8e-25 121.3 96 59.4
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 6.9e-24 116.7 105 55.2
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-23 115.5 143 48.3
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 3.5e-20 104.4 132 48.5
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 1.8e-19 102.1 99 50.5
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 4.3e-18 97.4 95 53.7
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 5.8e-15 87.0 64 65.6
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 5.5e-13 80.5 88 51.1
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 3.0e-11 74.7 70 61.4
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 3.9e-11 74.3 63 57.1
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 9.6e-10 69.7 51 64.7
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.6e-09 68.9 50 64.0
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.8e-09 68.2 82 45.1
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 4.8e-09 67.4 53 58.5
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 6.9e-08 63.5 109 36.7
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 9.0e-08 63.2 58 56.9
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 3.8e-06 57.8 57 45.6


User provided reference genes

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