Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 5.2e-165 584.3 298 100.0
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.9e-114 416.4 296 72.3
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.6e-113 413.3 300 72.0
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 6.0e-113 411.4 299 72.2
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 6.0e-113 411.4 297 73.1
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.3e-112 410.2 296 73.3
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.3e-112 409.5 263 81.0
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 2.3e-112 409.5 295 73.2
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 3.0e-112 409.1 299 71.2
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 8.7e-112 407.5 303 74.3
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.1e-111 407.1 295 71.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.1e-111 407.1 295 71.5
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.1e-111 407.1 296 70.9
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.9e-111 406.4 296 71.3
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.5e-111 406.0 300 71.3
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.5e-111 406.0 302 70.2
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.3e-111 405.6 296 75.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 4.3e-111 405.2 299 70.6
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 5.6e-111 404.8 300 72.3
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 9.6e-111 404.1 296 70.6
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 2.8e-110 402.5 304 70.4
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 4.8e-110 401.7 296 72.3
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 6.2e-110 401.4 299 70.6
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 3.1e-109 399.1 309 69.6
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 5.3e-109 398.3 296 70.9
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 5.3e-109 398.3 304 69.4
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 6.9e-109 397.9 299 70.6
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 9.0e-109 397.5 302 73.2
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 9.0e-109 397.5 317 68.5
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.0e-108 396.4 301 70.1
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.6e-108 396.0 268 73.9
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.6e-108 396.0 296 72.3
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 3.4e-108 395.6 295 69.2
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.4e-108 395.6 295 69.2
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 4.4e-108 395.2 295 72.5
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.4e-108 395.2 308 69.2
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 5.8e-108 394.8 295 69.2
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 5.8e-108 394.8 295 69.2
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 5.8e-108 394.8 298 68.1
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 5.8e-108 394.8 300 70.7
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 5.8e-108 394.8 300 70.7
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 9.9e-108 394.0 295 69.5
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.3e-107 393.7 296 72.3
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.3e-107 393.7 296 71.3
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 2.9e-107 392.5 304 67.8
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.8e-107 392.1 295 68.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.8e-107 392.1 302 68.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 4.9e-107 391.7 295 70.5
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.4e-106 390.2 296 71.3
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 2.4e-106 389.4 309 66.0
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 3.2e-106 389.0 295 69.5
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.2e-106 389.0 290 71.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 5.4e-106 388.3 295 71.9
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.2e-105 387.1 306 68.6
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 3.5e-105 385.6 306 68.3
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 6.0e-105 384.8 306 68.0
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 7.9e-105 384.4 307 68.7
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.3e-104 382.9 307 68.1
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 2.3e-104 382.9 311 68.2
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 2.3e-104 382.9 299 67.6
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.9e-103 379.8 306 67.6
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 7.4e-103 377.9 307 67.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 9.6e-103 377.5 300 67.3
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.6e-102 376.7 308 66.9
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.6e-102 376.7 308 66.9
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.1e-102 376.3 307 67.4
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.1e-102 376.3 307 67.4
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 3.6e-102 375.6 263 73.0
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.1e-101 372.5 302 66.6
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 6.9e-101 371.3 259 73.7
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.2e-100 370.5 264 74.2
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 2.0e-100 369.8 305 65.9
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 2.6e-100 369.4 258 77.5
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 5.8e-100 368.2 402 55.0
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 4.9e-99 365.2 304 70.4
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.4e-98 363.6 296 68.6
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 4.6e-97 358.6 268 74.6
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 6.7e-96 354.8 291 64.6
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.9e-95 353.2 300 67.3
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.4e-93 347.1 275 68.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.8e-93 346.7 283 63.3
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.3e-93 345.1 366 54.4
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 2.6e-92 342.8 246 72.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 2.6e-92 342.8 262 69.8
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 4.9e-91 338.6 267 67.0
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 7.1e-90 334.7 288 63.9
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.1e-89 333.2 236 76.7
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 7.9e-89 331.3 300 59.3
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.3e-88 330.5 294 61.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.1e-87 327.4 297 57.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.9e-87 326.6 252 69.0
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 8.2e-86 321.2 254 66.1
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.6e-84 316.2 331 55.6
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.2e-82 308.1 293 55.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 3.6e-81 305.8 268 57.5
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 6.7e-80 301.6 275 62.2
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.9e-74 283.5 244 60.7
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.5e-74 283.1 282 55.7
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.2e-68 264.2 309 52.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 2.6e-60 236.5 627 32.7
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.9e-59 233.0 193 65.3
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 3.2e-58 229.6 165 70.9
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 1.4e-56 224.2 188 59.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 2.6e-55 219.9 158 69.0
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 3.7e-54 216.1 222 51.8
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.9e-52 208.8 294 46.3
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.5e-47 194.1 210 54.3
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-46 191.0 129 73.6
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-42 177.6 174 58.0
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.2e-42 175.3 104 80.8
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.4e-40 171.0 90 88.9
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 4.0e-40 169.5 168 58.9
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-36 157.5 154 55.8
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.3e-34 149.8 172 47.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 4.4e-31 139.4 223 43.5
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 5.9e-28 129.0 80 77.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 5.8e-23 112.5 103 61.2
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 9.2e-21 105.1 254 33.1
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 2.8e-17 93.6 259 29.3
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.2e-13 80.1 46 82.6
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 6.0e-12 75.9 89 51.7
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 8.9e-08 62.0 347 24.5
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 1.3e-06 58.2 53 62.3
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.2e-06 57.4 60 56.7
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.2e-06 57.4 47 68.1
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 3.8e-06 56.6 74 48.6


User provided reference genes

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