Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 0.0e+00 1209.1 611 100.0
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 1.8e-260 902.5 619 76.1
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 1.1e-259 899.8 545 83.5
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 3.9e-252 874.8 533 82.2
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.9e-238 829.3 531 77.6
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 3.2e-238 828.6 539 78.1
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 5.5e-238 827.8 531 77.4
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 2.3e-236 822.4 533 78.2
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 1.1e-235 820.1 532 77.8
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 3.3e-235 818.5 532 77.1
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 9.7e-235 817.0 530 76.6
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 1.3e-234 816.6 533 77.5
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 2.2e-234 815.8 538 75.8
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 1.8e-233 812.8 539 76.1
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 2.4e-233 812.4 538 77.3
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 5.3e-233 811.2 536 75.6
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 2.0e-232 809.3 531 76.3
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 2.0e-232 809.3 532 76.3
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 2.6e-232 808.9 537 76.9
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 5.9e-232 807.7 538 75.8
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 1.0e-231 807.0 530 76.2
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 1.3e-231 806.6 418 97.4
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 1.7e-231 806.2 530 75.5
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 6.5e-231 804.3 541 75.2
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 8.5e-231 803.9 529 75.8
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 8.5e-231 803.9 529 75.8
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 1.1e-230 803.5 534 76.0
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.9e-230 802.7 538 74.9
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 4.2e-230 801.6 534 74.2
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.6e-229 799.7 538 74.5
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 1.6e-229 799.7 533 76.0
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.1e-229 799.3 533 76.2
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.1e-229 799.3 529 75.4
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 3.6e-229 798.5 537 75.0
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 4.7e-229 798.1 533 76.2
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 4.7e-229 798.1 530 75.7
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 6.1e-229 797.7 530 75.7
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 8.0e-229 797.3 533 76.4
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 8.0e-229 797.3 530 75.5
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 1.5e-227 793.1 542 73.2
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.0e-227 792.7 530 74.7
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 3.3e-227 792.0 600 69.2
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 4.4e-227 791.6 533 76.4
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.3e-226 790.0 548 74.3
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 4.1e-225 785.0 541 72.3
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 4.1e-225 785.0 541 72.3
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 7.0e-225 784.3 533 74.1
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 1.2e-224 783.5 535 74.2
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 1.6e-224 783.1 533 73.9
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 3.5e-224 781.9 539 72.4
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.5e-224 781.6 528 75.6
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 5.9e-224 781.2 533 73.4
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 7.7e-224 780.8 555 73.0
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 1.3e-223 780.0 532 73.7
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 1.7e-223 779.6 537 73.2
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 1.7e-223 779.6 532 72.4
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 1.7e-223 779.6 532 73.1
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 1.7e-223 779.6 583 69.3
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 2.2e-223 779.2 528 72.5
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 2.9e-223 778.9 528 75.2
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 2.9e-223 778.9 531 74.4
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 8.5e-223 777.3 535 73.5
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 8.5e-223 777.3 528 73.9
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.5e-223 777.3 526 75.1
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 1.1e-222 776.9 537 73.0
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 1.5e-222 776.5 529 73.3
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 4.2e-222 775.0 533 72.6
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 7.2e-222 774.2 531 71.9
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 1.2e-221 773.5 533 73.9
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 1.6e-221 773.1 529 73.0
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 2.1e-221 772.7 531 71.9
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 8.0e-221 770.8 541 72.3
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 1.0e-220 770.4 534 72.8
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.0e-220 770.4 527 73.8
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 4.0e-220 768.5 529 72.6
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 5.2e-220 768.1 539 73.7
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 6.8e-220 767.7 525 72.6
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 8.8e-220 767.3 539 70.3
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 8.8e-220 767.3 551 69.7
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 1.2e-219 766.9 500 75.6
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 2.0e-219 766.1 529 73.2
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 2.0e-219 766.1 537 71.9
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 2.6e-219 765.8 529 72.6
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 2.6e-219 765.8 534 72.7
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 7.5e-219 764.2 524 73.1
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 9.8e-219 763.8 537 71.5
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 2.2e-218 762.7 540 69.8
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 4.8e-218 761.5 539 71.4
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 4.8e-218 761.5 533 73.4
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 6.3e-218 761.1 539 71.1
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 6.3e-218 761.1 530 72.8
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 2.4e-217 759.2 530 71.5
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 5.4e-217 758.1 541 71.2
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 7.0e-217 757.7 540 71.3
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.6e-216 756.5 540 71.3
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 3.5e-216 755.4 533 72.4
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 5.0e-215 751.5 551 70.6
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 1.5e-214 750.0 530 71.7
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 1.9e-214 749.6 554 68.6
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 4.2e-214 748.4 537 71.1
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 9.5e-214 747.3 530 71.5
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 9.5e-214 747.3 530 71.5
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 2.1e-213 746.1 530 71.3
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 8.0e-213 744.2 532 71.2
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.0e-213 744.2 580 67.8
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 1.4e-212 743.4 539 69.9
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 1.4e-212 743.4 530 71.1
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 2.3e-212 742.7 526 72.1
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 3.0e-212 742.3 530 70.0
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 8.9e-212 740.7 525 70.7
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 5.7e-211 738.0 536 70.1
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 1.3e-210 736.9 572 67.0
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 8.3e-210 734.2 507 70.8
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.2e-205 720.3 573 65.6
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 1.2e-205 720.3 533 68.1
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 5.8e-203 711.4 458 78.4
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 1.7e-199 699.9 469 75.1
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 2.8e-197 692.6 500 67.8
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 3.1e-196 689.1 530 67.5
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 1.4e-193 680.2 562 62.8
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 2.1e-192 676.4 471 70.7
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 3.1e-188 662.5 540 65.4
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 6.8e-188 661.4 542 61.8
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 2.9e-186 656.0 433 76.2
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 1.4e-177 627.1 536 59.1
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 1.5e-174 617.1 549 58.5
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 1.1e-156 557.8 397 69.0
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 1.1e-156 557.8 397 69.0
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 1.4e-156 557.4 397 69.5
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 2.4e-156 556.6 359 79.7
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 4.6e-152 542.3 362 74.9
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 2.1e-136 490.3 528 48.9
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 1.7e-130 470.7 517 47.6
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 7.9e-128 461.8 323 70.6
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 2.9e-114 416.8 271 75.6
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 2.4e-108 397.1 251 77.7
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 2.3e-98 364.0 220 78.2
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 2.0e-83 314.3 195 74.9
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 8.3e-69 265.8 178 77.0
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 6.0e-59 233.0 194 63.4
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 1.5e-49 201.8 152 65.8
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 3.4e-46 190.7 147 65.3
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 2.2e-45 188.0 117 76.1
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 4.0e-39 167.2 115 70.4
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 5.8e-38 163.3 120 69.2
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 2.5e-25 121.3 80 76.2
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 3.7e-24 117.5 82 69.5
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 4.5e-22 110.5 91 56.0
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 2.2e-21 108.2 94 58.5
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 7.2e-20 103.2 109 52.3
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 1.0e-18 99.4 106 57.5
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 4.3e-17 94.0 79 60.8
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 7.4e-09 66.6 60 58.3
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 5.3e-07 60.5 464 22.8
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 7.0e-07 60.1 112 32.1
VMungo0464G0759 Vigna mungo HOM05D004765 ORTHO05D005900 5.9e-06 57.0 53 52.8


User provided reference genes

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