Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 9.9e-95 350.1 179 100.0
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 4.7e-89 331.3 179 95.5
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 2.4e-69 265.8 177 76.3
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 3.4e-63 245.4 176 74.4
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 3.8e-38 162.2 187 50.8
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.1e-36 156.4 175 55.4
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 2.7e-36 156.0 139 63.3
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 7.9e-36 154.5 129 65.9
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 7.9e-36 154.5 99 79.8
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 3.0e-35 152.5 133 61.7
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 8.8e-35 151.0 101 78.2
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 2.0e-34 149.8 102 75.5
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 3.3e-34 149.1 102 75.5
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 3.3e-34 149.1 179 54.2
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 4.4e-34 148.7 105 75.2
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 5.7e-34 148.3 185 49.7
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 5.7e-34 148.3 88 84.1
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 7.4e-34 147.9 172 52.9
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 7.4e-34 147.9 105 73.3
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 9.7e-34 147.5 89 82.0
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 9.7e-34 147.5 101 77.2
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.3e-33 147.1 89 82.0
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.3e-33 147.1 89 82.0
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.7e-33 146.7 174 53.4
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.7e-33 146.7 102 74.5
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.8e-33 146.0 98 76.5
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.8e-33 146.0 102 76.5
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 2.8e-33 146.0 116 69.8
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 3.7e-33 145.6 102 72.5
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 3.7e-33 145.6 99 74.7
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 3.7e-33 145.6 168 53.6
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 6.3e-33 144.8 93 79.6
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 8.2e-33 144.4 102 75.5
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.1e-32 144.1 96 77.1
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 1.4e-32 143.7 105 72.4
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.4e-32 143.7 105 71.4
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.8e-32 143.3 107 69.2
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.4e-32 142.9 90 77.8
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 3.1e-32 142.5 126 61.9
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 4.1e-32 142.1 163 50.9
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 4.1e-32 142.1 102 71.6
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 5.3e-32 141.7 168 54.2
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 5.3e-32 141.7 100 71.0
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 5.3e-32 141.7 112 66.1
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 7.0e-32 141.4 99 72.7
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 7.0e-32 141.4 102 70.6
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 7.0e-32 141.4 118 63.6
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 9.1e-32 141.0 100 71.0
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 9.1e-32 141.0 100 72.0
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 9.1e-32 141.0 133 60.2
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.2e-31 140.6 105 69.5
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.2e-31 140.6 100 72.0
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 1.5e-31 140.2 171 50.9
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.5e-31 140.2 101 72.3
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 1.5e-31 140.2 163 50.3
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 2.0e-31 139.8 97 71.1
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 2.0e-31 139.8 89 79.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 2.6e-31 139.4 99 72.7
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 3.5e-31 139.0 102 70.6
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 3.5e-31 139.0 108 70.4
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 4.5e-31 138.7 100 72.0
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 5.9e-31 138.3 170 51.2
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 7.7e-31 137.9 174 51.1
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.0e-30 137.5 121 62.0
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.0e-30 137.5 100 71.0
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 1.0e-30 137.5 88 72.7
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.0e-30 137.5 134 58.2
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.3e-30 137.1 114 64.9
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 1.3e-30 137.1 103 70.9
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 2.9e-30 136.0 104 68.3
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 2.9e-30 136.0 183 49.7
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 3.8e-30 135.6 174 50.6
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 3.8e-30 135.6 103 68.0
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 5.0e-30 135.2 100 70.0
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 5.0e-30 135.2 100 70.0
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 5.0e-30 135.2 186 47.8
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 5.0e-30 135.2 106 67.0
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 8.5e-30 134.4 180 48.3
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 8.5e-30 134.4 103 67.0
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.1e-29 134.0 97 71.1
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.5e-29 133.7 183 49.2
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.5e-29 133.7 184 47.8
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.5e-29 133.7 184 47.8
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.5e-29 133.7 184 47.8
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 1.5e-29 133.7 86 76.7
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 1.5e-29 133.7 100 70.0
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.5e-29 133.7 81 81.5
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 2.5e-29 132.9 102 66.7
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 3.2e-29 132.5 180 48.9
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 3.2e-29 132.5 106 68.9
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 4.2e-29 132.1 106 66.0
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 7.2e-29 131.3 142 56.3
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.2e-28 130.6 119 63.0
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.6e-28 130.2 110 62.7
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 4.7e-28 128.6 102 65.7
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 6.1e-28 128.3 172 48.3
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 1.0e-27 127.5 93 71.0
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 2.3e-27 126.3 86 73.3
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 6.7e-27 124.8 89 69.7
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 2.0e-26 123.2 77 77.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 7.4e-26 121.3 77 77.9
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 9.7e-26 120.9 99 62.6
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 2.2e-25 119.8 152 50.0
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.8e-25 118.6 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 1.4e-24 117.1 90 62.2
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 6.5e-22 108.2 83 62.7
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 4.2e-21 105.5 101 51.5
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 2.8e-17 92.8 98 54.1
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 2.8e-17 92.8 176 37.5
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.0e-16 88.2 74 52.7
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.7e-15 86.3 50 82.0
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 3.5e-15 85.9 48 87.5
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 7.7e-15 84.7 51 80.4
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 7.7e-15 84.7 51 80.4
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 7.7e-15 84.7 97 56.7
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 1.8e-08 63.5 138 41.3
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.1e-08 62.4 55 60.0
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 5.4e-08 62.0 54 59.3
Ciclev10023008m.g Citrus clementina HOM05D002854 ORTHO05D003051 4.5e-07 58.9 87 39.1
Hma1.2p1_0493F.1_g164910 Hydrangea macrophylla HOM05D002854 ORTHO05D003051 2.3e-06 56.6 87 35.6
Cpa.g.sc3.441 Carica papaya HOM05D002854 ORTHO05D003051 3.8e-06 55.8 132 29.5
Phvul.004G141000 Phaseolus vulgaris HOM05D002854 ORTHO05D003051 6.6e-06 55.1 105 34.3


User provided reference genes

Program Settings