Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 7.6e-95 350.5 180 100.0
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.0e-79 299.3 164 93.3
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 2.0e-47 193.0 142 72.5
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.2e-44 183.7 160 56.9
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.4e-43 180.3 153 58.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 8.8e-43 177.6 167 58.1
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.0e-42 176.4 163 58.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 4.4e-42 175.3 158 57.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 7.5e-42 174.5 158 57.0
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 9.7e-42 174.1 158 55.1
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.8e-41 172.6 178 50.6
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.8e-41 172.6 162 55.6
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 8.2e-41 171.0 154 55.8
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 8.2e-41 171.0 163 53.4
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.4e-40 169.5 165 52.1
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 4.1e-40 168.7 160 55.6
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 4.1e-40 168.7 161 51.6
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 5.3e-40 168.3 154 55.8
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 9.1e-40 167.5 154 55.2
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.2e-39 167.2 175 50.3
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.6e-39 166.8 160 53.8
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.0e-39 166.4 157 54.8
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.7e-39 166.0 152 54.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.7e-39 166.0 152 54.6
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.7e-39 166.0 152 54.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 2.7e-39 166.0 169 52.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.7e-39 166.0 150 57.3
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.5e-39 165.2 160 53.8
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 7.7e-39 164.5 153 53.6
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 7.7e-39 164.5 158 52.5
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.0e-38 164.1 157 51.6
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.0e-38 164.1 159 52.8
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.7e-38 163.3 160 52.5
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.2e-38 162.9 155 53.5
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.9e-38 162.5 157 52.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.9e-38 162.5 153 53.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.8e-38 162.2 160 53.1
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 5.0e-38 161.8 157 50.3
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 6.5e-38 161.4 152 55.9
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 6.5e-38 161.4 160 51.2
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.5e-38 161.4 160 52.5
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 8.5e-38 161.0 156 50.0
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.1e-37 160.6 163 54.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.5e-37 160.2 160 52.5
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.9e-37 159.8 172 50.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.9e-37 159.8 152 55.9
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 3.2e-37 159.1 158 51.3
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.5e-37 158.3 155 52.9
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.2e-37 157.9 160 51.9
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.2e-36 157.1 146 54.1
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.2e-36 157.1 151 55.0
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.6e-36 156.8 156 49.4
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 2.1e-36 156.4 152 52.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.7e-36 156.0 163 50.3
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 6.1e-36 154.8 157 52.2
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 6.1e-36 154.8 159 48.4
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 8.0e-36 154.5 155 50.3
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.0e-35 154.1 159 52.8
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 5.2e-35 151.8 156 51.9
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.0e-34 149.8 154 47.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.6e-34 149.4 159 49.7
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.4e-34 149.1 139 54.0
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 4.4e-34 148.7 150 52.7
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 4.4e-34 148.7 161 47.2
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 5.7e-34 148.3 153 50.3
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 7.5e-34 147.9 166 44.0
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.3e-33 147.1 154 48.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 3.7e-33 145.6 149 51.0
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 3.7e-33 145.6 166 47.6
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 6.3e-33 144.8 150 52.0
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 6.3e-33 144.8 156 46.8
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.4e-32 143.7 154 49.4
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.8e-32 143.3 158 51.3
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.8e-32 143.3 151 47.7
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.4e-32 142.9 158 51.3
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.4e-32 142.9 185 43.8
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.1e-32 142.5 150 48.7
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.1e-32 142.5 150 48.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 5.4e-32 141.7 150 48.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 5.4e-32 141.7 153 48.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.0e-32 141.4 150 47.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.0e-32 141.4 150 47.3
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 9.1e-32 141.0 150 47.3
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 9.1e-32 141.0 148 47.3
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.2e-31 140.6 150 46.7
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.2e-31 140.6 156 46.2
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.2e-31 140.6 156 48.7
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.6e-31 140.2 150 48.0
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 2.7e-31 139.4 154 46.1
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 5.9e-31 138.3 150 47.3
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.9e-31 138.3 150 47.3
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 5.9e-31 138.3 123 57.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.0e-30 137.5 174 46.0
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.3e-30 137.1 150 46.0
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.7e-30 136.7 144 52.8
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.7e-30 136.7 136 52.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.9e-30 136.0 127 57.5
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 6.5e-30 134.8 147 49.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-29 133.7 166 42.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.2e-29 132.5 127 52.8
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 4.7e-28 128.6 134 54.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 5.2e-27 125.2 161 48.4
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 4.4e-26 122.1 165 41.8
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.2e-24 114.4 149 45.0
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.2e-24 114.4 117 46.2
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 7.3e-21 104.8 79 59.5
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.5e-21 104.4 114 50.0
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.4e-19 100.5 80 57.5
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.1e-11 74.3 148 35.1
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 5.2e-11 72.0 127 36.2
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.7e-09 65.9 65 52.3
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.4e-08 62.0 58 48.3


User provided reference genes

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