Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1563.1 790 100.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1480.7 790 93.9
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 0.0e+00 1286.6 787 82.0
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 0.0e+00 1215.7 794 77.1
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 0.0e+00 1119.8 792 71.1
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 7.2e-299 1030.4 793 64.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 2.5e-275 952.2 799 59.2
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 3.5e-269 931.8 784 60.2
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 2.8e-266 922.2 800 58.2
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 8.1e-266 920.6 785 59.7
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.3e-263 913.3 795 59.1
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 2.9e-263 912.1 792 59.8
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 4.9e-263 911.4 795 59.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.9e-262 909.4 793 57.8
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 4.1e-262 908.3 802 58.2
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.1e-261 906.0 801 58.4
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 7.8e-261 904.0 787 58.7
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 1.3e-260 903.3 793 58.5
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 1.3e-260 903.3 802 58.0
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.9e-260 901.7 793 58.3
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 5.1e-260 901.4 784 58.7
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 8.6e-260 900.6 793 58.9
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 3.6e-258 895.2 793 58.6
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 2.0e-256 889.4 794 57.3
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 3.4e-256 888.6 789 59.1
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 5.8e-256 887.9 792 59.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 9.9e-256 887.1 791 57.6
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.3e-255 886.7 796 58.0
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 8.4e-255 884.0 802 57.4
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.2e-254 881.7 796 57.4
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.2e-253 880.2 796 57.3
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.7e-253 879.0 801 55.7
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-252 876.7 796 57.2
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.3e-252 876.7 795 56.9
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 3.9e-252 875.2 790 58.2
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 5.1e-252 874.8 796 57.2
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 5.1e-252 874.8 796 57.2
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 5.6e-251 871.3 805 56.5
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.3e-250 870.2 847 54.1
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 4.8e-250 868.2 792 57.6
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 6.9e-249 864.4 806 56.6
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 9.0e-249 864.0 791 55.1
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.2e-248 863.6 791 57.9
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 4.4e-248 861.7 804 56.8
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 2.9e-247 859.0 789 55.4
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 3.8e-247 858.6 795 56.2
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.1e-246 857.1 787 56.5
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 4.2e-246 855.1 796 57.4
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 5.4e-246 854.7 852 54.2
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 6.0e-245 851.3 797 55.6
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 7.9e-245 850.9 812 56.4
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 2.5e-243 845.9 801 54.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.1e-241 839.0 811 54.1
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 2.0e-240 836.3 799 53.4
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 5.8e-240 834.7 848 52.5
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.3e-239 833.6 811 53.5
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 2.9e-239 832.4 816 53.4
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 3.5e-237 825.5 790 53.4
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.3e-236 823.5 644 64.6
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.6e-232 809.3 795 53.7
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 7.6e-232 807.7 792 53.3
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 6.5e-231 804.7 800 53.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 5.5e-230 801.6 804 52.7
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.6e-229 800.0 797 52.7
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 1.1e-227 793.9 808 51.7
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 3.3e-227 792.3 796 52.1
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 7.4e-227 791.2 805 51.9
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 6.3e-226 788.1 795 51.9
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 2.4e-225 786.2 803 51.9
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 4.1e-225 785.4 795 51.7
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 4.1e-225 785.4 808 51.9
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 9.0e-225 784.3 806 52.1
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.0e-224 783.1 803 50.8
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 3.8e-223 778.9 798 52.0
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 7.9e-221 771.2 793 52.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 3.9e-220 768.8 640 61.2
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 3.9e-220 768.8 802 51.2
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 8.2e-218 761.1 794 50.8
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.4e-217 759.6 795 51.1
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 3.1e-217 759.2 760 52.6
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 5.1e-212 741.9 731 54.0
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.3e-210 737.3 803 51.3
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 6.9e-209 731.5 829 50.8
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 9.4e-206 721.1 798 50.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 6.1e-205 718.4 786 49.6
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 7.4e-203 711.4 780 47.6
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 8.2e-202 708.0 798 49.6
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 2.7e-197 693.0 809 46.6
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 6.8e-188 661.8 669 52.6
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 1.8e-185 653.7 581 58.3
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-184 651.0 786 47.3
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 4.2e-182 642.5 647 54.4
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 2.7e-168 596.7 804 43.2
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 5.2e-148 529.3 605 49.3
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 3.9e-143 513.1 791 39.4
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.6e-120 438.0 800 38.0
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 9.0e-116 422.2 799 36.7
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 3.0e-103 380.6 838 34.6
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.1e-89 335.5 837 32.3
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 3.6e-88 330.5 305 54.8
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 5.2e-87 326.6 417 45.1
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 1.2e-83 315.5 256 61.7
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 5.7e-78 296.6 252 60.7
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 7.7e-75 286.2 285 51.2
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 2.5e-73 281.2 285 50.9
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.2e-73 280.8 309 49.5
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 4.4e-70 270.4 252 54.8
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.0e-55 220.7 197 57.4
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.5e-43 181.0 146 59.6
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 3.6e-40 171.0 221 43.0
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 2.0e-38 165.2 204 42.6
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 2.2e-37 161.8 276 38.4
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-36 159.5 987 23.1
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 5.4e-36 157.1 168 47.6
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 2.7e-27 128.3 87 70.1
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 1.2e-22 112.8 844 21.3
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 2.8e-16 91.7 117 45.3
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 3.8e-13 81.3 168 35.7
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 3.9e-10 71.2 45 66.7
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 4.0e-07 61.2 35 68.6
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 4.0e-07 61.2 60 53.3
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 2.0e-06 58.9 50 56.0


User provided reference genes

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