Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 9.5e-56 219.9 111 100.0
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 8.1e-55 216.9 111 99.1
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 6.6e-49 197.2 111 89.2
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 5.8e-45 184.1 109 82.6
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 7.6e-45 183.7 111 80.2
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 9.9e-45 183.3 110 81.8
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 9.9e-45 183.3 110 81.8
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 1.3e-44 183.0 110 80.9
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 1.3e-44 183.0 111 81.1
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 2.2e-44 182.2 111 80.2
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 3.8e-44 181.4 110 79.1
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 3.8e-44 181.4 111 80.2
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 3.8e-44 181.4 111 80.2
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 4.9e-44 181.0 111 79.3
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 4.9e-44 181.0 111 78.4
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 4.9e-44 181.0 108 81.5
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 6.4e-44 180.6 111 80.2
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 8.4e-44 180.3 111 81.1
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 8.4e-44 180.3 111 78.4
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 8.4e-44 180.3 110 79.1
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 1.1e-43 179.9 110 80.9
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 1.1e-43 179.9 110 80.9
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 1.9e-43 179.1 110 77.3
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 2.4e-43 178.7 111 78.4
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 2.4e-43 178.7 111 78.4
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 3.2e-43 178.3 111 78.4
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 3.2e-43 178.3 110 80.0
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 4.2e-43 177.9 111 75.7
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 4.2e-43 177.9 110 79.1
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 4.2e-43 177.9 110 79.1
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 4.2e-43 177.9 111 77.5
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 5.4e-43 177.6 109 78.0
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 7.1e-43 177.2 111 77.5
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 7.1e-43 177.2 108 78.7
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 7.1e-43 177.2 111 76.6
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 7.1e-43 177.2 108 80.6
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 9.3e-43 176.8 108 79.6
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 9.3e-43 176.8 111 78.4
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 9.3e-43 176.8 109 78.9
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 9.3e-43 176.8 109 77.1
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 9.3e-43 176.8 110 78.2
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.2e-42 176.4 112 78.6
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 1.2e-42 176.4 111 75.7
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 1.6e-42 176.0 111 76.6
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 2.1e-42 175.6 108 77.8
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 2.1e-42 175.6 111 77.5
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 2.1e-42 175.6 111 77.5
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.1e-42 175.6 111 77.5
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 2.7e-42 175.3 111 74.8
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 2.7e-42 175.3 108 77.8
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 3.5e-42 174.9 109 75.2
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 4.6e-42 174.5 111 74.8
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 4.6e-42 174.5 111 76.6
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 4.6e-42 174.5 108 76.9
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 4.6e-42 174.5 108 76.9
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 7.8e-42 173.7 109 77.1
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 7.8e-42 173.7 108 76.9
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 7.8e-42 173.7 107 75.7
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 7.8e-42 173.7 107 78.5
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 1.0e-41 173.3 109 75.2
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 1.3e-41 172.9 111 76.6
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 1.3e-41 172.9 111 73.0
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 1.3e-41 172.9 111 73.0
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 1.7e-41 172.6 110 76.4
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.7e-41 172.6 111 74.8
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 1.7e-41 172.6 108 75.9
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 1.7e-41 172.6 109 77.1
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 2.3e-41 172.2 111 77.5
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 2.3e-41 172.2 111 77.5
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 2.3e-41 172.2 111 77.5
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 2.3e-41 172.2 108 75.9
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 3.0e-41 171.8 111 75.7
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 3.0e-41 171.8 111 73.9
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 3.9e-41 171.4 108 74.1
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 5.1e-41 171.0 106 76.4
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 5.1e-41 171.0 111 75.7
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 5.1e-41 171.0 108 75.0
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 5.1e-41 171.0 108 76.9
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 6.6e-41 170.6 112 75.9
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 6.6e-41 170.6 108 75.9
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 8.7e-41 170.2 108 74.1
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 8.7e-41 170.2 108 74.1
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 8.7e-41 170.2 111 72.1
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 8.7e-41 170.2 105 76.2
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 8.7e-41 170.2 105 76.2
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 8.7e-41 170.2 109 75.2
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 1.1e-40 169.9 109 78.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-40 169.5 110 71.8
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 1.5e-40 169.5 109 71.6
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 1.5e-40 169.5 108 73.1
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 1.9e-40 169.1 110 71.8
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 1.9e-40 169.1 110 71.8
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 1.9e-40 169.1 109 75.2
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 2.5e-40 168.7 108 72.2
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 3.3e-40 168.3 111 73.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 3.3e-40 168.3 110 70.9
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 3.3e-40 168.3 109 71.6
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 5.6e-40 167.5 110 70.9
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 5.6e-40 167.5 111 73.0
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 5.6e-40 167.5 108 72.2
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 7.3e-40 167.2 108 73.1
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 7.3e-40 167.2 112 74.1
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 7.3e-40 167.2 108 71.3
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 7.3e-40 167.2 109 73.4
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 7.3e-40 167.2 109 72.5
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 9.6e-40 166.8 109 74.3
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 9.6e-40 166.8 110 74.5
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 1.3e-39 166.4 108 75.9
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 1.3e-39 166.4 108 72.2
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 2.8e-39 165.2 111 69.4
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 8.1e-39 163.7 108 72.2
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 4.0e-38 161.4 109 71.6
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 5.3e-38 161.0 111 72.1
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 5.3e-38 161.0 108 70.4
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 6.9e-38 160.6 124 66.1
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 2.0e-37 159.1 120 67.5
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 4.5e-37 157.9 104 72.1
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 1.7e-36 156.0 110 68.2
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 9.3e-35 150.2 93 75.3
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 1.2e-34 149.8 111 69.4
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 1.3e-33 146.4 110 66.4
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.5e-32 142.1 89 77.5
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 3.3e-32 141.7 86 77.9
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 3.7e-31 138.3 86 73.3
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 6.2e-31 137.5 82 80.5
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 8.1e-31 137.1 108 63.9
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 1.1e-30 136.7 86 74.4
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 2.4e-30 135.6 86 73.3
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 3.1e-30 135.2 102 64.7
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 4.0e-30 134.8 83 75.9
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 9.0e-30 133.7 86 74.4
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 9.0e-30 133.7 170 47.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.2e-29 133.3 86 73.3
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 7.6e-29 130.6 81 74.1
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 6.4e-28 127.5 108 53.7
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 1.4e-27 126.3 93 69.9
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 3.2e-27 125.2 109 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 9.3e-27 123.6 108 51.9
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 3.5e-26 121.7 104 51.9
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 4.6e-26 121.3 150 48.0
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 4.6e-26 121.3 84 72.6
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 6.0e-26 120.9 82 70.7
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.0e-25 120.2 82 70.7
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 1.8e-25 119.4 111 54.1
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 3.9e-25 118.2 108 59.3
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 8.7e-25 117.1 108 58.3
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.5e-24 115.5 82 70.7
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 8.2e-23 110.5 109 52.3
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.4e-22 109.8 82 64.6
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 3.1e-22 108.6 60 81.7
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 4.6e-18 94.7 65 70.8
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.8e-17 92.8 55 78.2
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 1.5e-16 89.7 57 64.9
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 1.4e-14 83.2 59 69.5
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 5.7e-08 61.2 39 71.8
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 9.7e-08 60.5 103 41.7
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.2e-07 59.3 37 67.6


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