Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.3e-134 482.3 249 100.0
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.0e-106 389.4 256 82.0
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 2.1e-74 283.1 254 63.0
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 5.8e-61 238.4 259 56.4
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.4e-46 190.7 254 50.0
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 2.0e-45 186.8 254 48.0
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.6e-45 186.4 254 47.6
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 4.5e-45 185.7 251 48.2
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 4.5e-45 185.7 246 46.7
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 7.6e-45 184.9 261 46.7
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 6.5e-44 181.8 253 45.8
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.1e-43 181.0 257 44.0
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 2.5e-43 179.9 255 46.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.2e-42 177.6 236 48.7
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.1e-42 176.8 253 45.8
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.6e-42 175.6 253 45.1
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.8e-41 173.7 246 46.7
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 3.0e-41 172.9 217 47.5
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.1e-41 172.2 206 50.0
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 8.7e-41 171.4 242 45.0
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 1.9e-40 170.2 250 46.4
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.3e-40 169.1 246 46.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 4.8e-39 165.6 208 45.7
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 4.8e-39 165.6 252 44.8
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 8.2e-39 164.9 249 44.6
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.4e-38 164.1 252 44.0
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.4e-38 163.3 250 44.0
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 9.0e-38 161.4 230 44.8
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.2e-37 161.0 252 44.0
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.5e-37 160.6 254 42.1
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 2.6e-37 159.8 214 45.8
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 3.4e-37 159.5 254 42.1
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 4.5e-37 159.1 206 46.1
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 5.9e-37 158.7 253 43.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 7.6e-37 158.3 262 40.8
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 7.6e-37 158.3 244 43.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.0e-36 157.9 250 46.4
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.9e-36 156.4 215 45.1
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 3.8e-36 156.0 182 46.7
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 5.0e-36 155.6 217 45.6
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 5.0e-36 155.6 262 42.7
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 6.5e-36 155.2 240 43.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.9e-35 153.7 290 40.0
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.9e-35 153.7 248 43.1
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.9e-35 153.7 206 45.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 2.5e-35 153.3 206 46.6
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.5e-35 153.3 248 43.5
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 3.2e-35 152.9 253 41.1
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 4.2e-35 152.5 232 42.7
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 7.2e-35 151.8 220 44.5
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 9.4e-35 151.4 220 44.1
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 9.4e-35 151.4 255 45.5
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.2e-34 151.0 209 44.5
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.1e-34 150.2 259 40.5
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.7e-34 149.8 216 44.9
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 3.6e-34 149.4 223 43.5
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 6.1e-34 148.7 209 42.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.8e-33 147.1 255 42.4
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 5.1e-33 145.6 209 45.5
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 6.7e-33 145.2 254 40.6
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 8.8e-33 144.8 248 42.3
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.5e-32 144.1 291 38.1
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 1.5e-32 144.1 213 42.3
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.9e-32 143.7 211 41.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.9e-32 143.7 247 42.9
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.5e-32 143.3 265 40.0
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.8e-31 139.8 241 43.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 3.7e-31 139.4 258 39.9
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 8.2e-31 138.3 245 42.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 3.1e-30 136.3 202 41.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 4.1e-30 136.0 203 44.8
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 9.1e-30 134.8 216 40.3
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 9.1e-30 134.8 226 41.2
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.2e-29 134.4 196 45.4
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.2e-29 134.4 276 37.3
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 2.6e-29 133.3 217 46.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 4.5e-29 132.5 210 42.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 1.3e-28 131.0 189 44.4
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.9e-28 129.8 239 39.7
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 2.9e-28 129.8 196 42.9
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 3.8e-28 129.4 197 40.6
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 8.5e-28 128.3 184 44.0
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 8.5e-28 128.3 184 44.0
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 8.5e-28 128.3 234 38.9
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.4e-27 127.5 165 44.2
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.4e-27 127.5 150 48.0
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.4e-27 127.5 152 46.1
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.9e-27 127.1 173 45.7
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 4.2e-27 125.9 185 43.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 5.5e-27 125.6 248 39.5
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 5.5e-27 125.6 185 43.8
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.5e-27 125.6 190 43.2
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 5.5e-27 125.6 199 42.7
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 7.2e-27 125.2 171 43.9
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 1.2e-26 124.4 203 42.9
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.2e-26 124.4 166 43.4
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 1.2e-26 124.4 179 40.8
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.7e-26 123.2 256 37.1
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.7e-26 123.2 215 40.9
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 6.1e-26 122.1 231 37.2
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 2.3e-25 120.2 125 50.4
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.0e-25 119.8 202 39.1
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 3.9e-25 119.4 228 37.3
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 6.7e-25 118.6 247 36.8
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.3e-24 116.3 142 48.6
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.3e-23 114.4 223 38.6
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 4.8e-23 112.5 132 47.7
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 6.3e-23 112.1 202 39.6
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 3.4e-21 106.3 82 65.9
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.9e-21 105.5 85 61.2
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 1.3e-20 104.4 201 36.3
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 2.7e-18 96.7 153 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.0e-17 94.7 107 47.7
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 2.0e-16 90.5 93 45.2
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 3.3e-16 89.7 215 32.1
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 2.2e-15 87.0 135 42.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.4e-14 83.6 117 47.9
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 4.1e-14 82.8 157 35.7
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 2.6e-13 80.1 97 51.5
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.3e-12 77.8 110 45.5
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 1.2e-10 71.2 144 37.5
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.4e-06 57.8 90 32.2


User provided reference genes

Program Settings