Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.4e-138 494.2 312 100.0
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 6.9e-120 434.5 315 77.8
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 2.1e-84 316.6 317 61.2
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.8e-80 303.5 326 57.1
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 4.0e-59 232.6 318 48.7
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 1.2e-58 231.1 282 52.8
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 4.9e-57 225.7 282 47.9
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.2e-56 223.0 253 52.2
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 4.1e-56 222.6 281 50.2
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 5.4e-56 222.2 260 48.8
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 7.1e-56 221.9 319 48.0
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 1.2e-55 221.1 282 47.9
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 2.1e-55 220.3 261 48.7
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 2.1e-55 220.3 250 49.2
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 2.1e-55 220.3 262 53.4
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 2.1e-55 220.3 279 55.2
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 2.7e-55 219.9 281 49.5
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 2.7e-55 219.9 261 48.3
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.7e-54 217.2 319 41.1
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.7e-54 217.2 312 43.6
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 3.9e-54 216.1 285 45.6
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 8.6e-54 214.9 262 48.1
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.1e-53 214.5 287 49.1
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 1.5e-53 214.2 318 47.2
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 2.5e-53 213.4 263 48.3
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 3.3e-53 213.0 285 57.2
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 3.3e-53 213.0 290 44.1
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 4.3e-53 212.6 292 49.3
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 5.6e-53 212.2 260 46.9
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.2e-52 211.1 257 49.0
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.1e-52 210.3 258 50.0
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 2.1e-52 210.3 239 54.8
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 2.8e-52 209.9 275 48.0
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 4.7e-52 209.1 320 41.2
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 6.2e-52 208.8 250 50.0
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 1.1e-51 208.0 318 40.6
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.4e-51 207.6 258 50.4
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.4e-51 207.6 258 50.4
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.4e-51 207.6 277 45.8
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 1.4e-51 207.6 277 45.8
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 3.1e-51 206.5 289 44.3
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 5.2e-51 205.7 271 46.1
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 5.2e-51 205.7 325 40.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.5e-50 204.1 240 49.6
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 2.6e-50 203.4 276 45.7
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 3.4e-50 203.0 246 48.4
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 3.4e-50 203.0 245 49.4
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 4.4e-50 202.6 274 46.0
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 4.4e-50 202.6 308 42.9
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 4.4e-50 202.6 295 42.7
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 5.8e-50 202.2 258 49.2
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 5.8e-50 202.2 276 43.8
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 9.9e-50 201.4 257 59.5
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.9e-49 199.9 266 47.4
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.9e-49 199.9 257 54.1
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 3.8e-49 199.5 251 47.4
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 3.8e-49 199.5 243 47.7
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 4.9e-49 199.1 251 47.4
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 6.4e-49 198.7 258 46.9
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 1.9e-48 197.2 258 47.3
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.9e-48 197.2 260 46.5
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 1.9e-48 197.2 258 47.3
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 1.9e-48 197.2 258 47.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 1.9e-48 197.2 251 47.0
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 1.9e-48 197.2 239 46.4
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 2.4e-48 196.8 300 41.7
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 4.1e-48 196.1 260 58.1
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 4.1e-48 196.1 319 45.1
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 7.1e-48 195.3 310 42.9
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 7.1e-48 195.3 274 44.5
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 9.2e-48 194.9 318 52.5
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 1.2e-47 194.5 317 42.0
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.2e-47 194.5 258 50.4
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 3.5e-47 193.0 258 46.5
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 6.0e-47 192.2 318 48.7
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 6.0e-47 192.2 274 43.1
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 7.8e-47 191.8 238 46.6
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.0e-46 191.4 246 45.5
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 1.3e-46 191.0 242 45.9
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.7e-46 190.7 276 42.4
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.5e-45 187.6 255 46.3
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.5e-45 187.6 238 53.4
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.9e-45 187.2 250 44.8
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 5.6e-45 185.7 250 48.0
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 7.3e-45 185.3 264 43.2
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 7.3e-45 185.3 267 44.9
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 7.3e-45 185.3 262 45.8
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.6e-44 184.1 251 43.4
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 6.2e-44 182.2 250 43.6
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.3e-41 174.5 248 41.1
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.4e-40 170.2 317 39.1
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 3.2e-40 169.9 157 58.6
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 2.3e-38 163.7 216 46.8
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.1e-37 161.4 224 43.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 7.3e-37 158.7 167 50.9
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 3.1e-35 153.3 309 37.2
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 5.3e-35 152.5 246 54.1
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 1.3e-33 147.9 266 41.0
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 4.9e-33 146.0 244 43.0
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 3.9e-30 136.3 260 36.9
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 3.3e-29 133.3 271 39.1
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 1.3e-28 131.3 221 47.5
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 2.8e-28 130.2 144 48.6
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 8.1e-28 128.6 152 42.8
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 6.4e-25 119.0 224 37.1
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.9e-21 107.5 130 51.5
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 5.6e-21 105.9 115 50.4
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 3.1e-19 100.1 242 30.2
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 2.0e-18 97.4 137 42.3
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 2.5e-16 90.5 142 39.4
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 3.2e-16 90.1 167 36.5
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 3.2e-16 90.1 151 33.8
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 4.2e-16 89.7 142 35.9
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 3.5e-15 86.7 275 30.9
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 2.3e-14 84.0 145 42.1
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.2e-10 71.6 141 38.3
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 7.6e-10 68.9 167 33.5
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 3.8e-09 66.6 120 38.3
PRCOL_00003382 Prasinoderma coloniale HOM05D006904 ORTHO05D008439 1.6e-07 61.2 89 43.8


User provided reference genes

Program Settings