Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 1.1e-152 543.5 324 100.0
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 8.8e-134 480.7 315 83.5
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 1.2e-93 347.4 247 71.3
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 2.3e-86 323.2 248 66.1
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 3.5e-58 229.6 242 51.2
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 4.6e-58 229.2 242 54.5
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.3e-57 227.6 238 54.6
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 1.3e-57 227.6 232 55.6
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.9e-56 223.8 245 52.2
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 3.3e-56 223.0 232 56.0
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 4.3e-56 222.6 239 58.2
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 4.3e-56 222.6 244 57.4
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 5.6e-56 222.2 245 50.6
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 5.6e-56 222.2 238 52.1
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 5.6e-56 222.2 245 58.4
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.6e-55 220.7 249 49.0
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 2.1e-55 220.3 245 51.8
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 2.1e-55 220.3 231 53.7
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 2.8e-55 219.9 240 53.3
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 8.1e-55 218.4 249 51.0
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 8.1e-55 218.4 249 51.0
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 8.1e-55 218.4 247 52.6
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 1.1e-54 218.0 249 49.0
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 1.1e-54 218.0 240 51.2
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 1.4e-54 217.6 248 56.0
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.4e-54 217.6 246 52.0
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 1.8e-54 217.2 251 48.6
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 3.1e-54 216.5 240 51.2
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 4.0e-54 216.1 240 51.7
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 5.3e-54 215.7 231 52.4
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 5.3e-54 215.7 241 51.5
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.3e-54 215.7 244 50.8
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 6.9e-54 215.3 249 49.4
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 6.9e-54 215.3 241 52.3
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-53 214.5 254 49.2
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.5e-53 214.2 241 50.6
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 3.4e-53 213.0 251 48.2
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 4.4e-53 212.6 251 48.6
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 4.4e-53 212.6 239 57.3
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 9.9e-53 211.5 247 56.3
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 1.3e-52 211.1 248 48.8
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.7e-52 210.7 254 47.6
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 2.9e-52 209.9 251 47.4
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 4.9e-52 209.1 251 47.8
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 6.4e-52 208.8 243 49.4
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.4e-51 207.6 248 50.0
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 1.4e-51 207.6 251 48.2
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.4e-51 206.8 242 48.3
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 4.2e-51 206.1 229 52.0
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 5.4e-51 205.7 249 49.0
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 5.4e-51 205.7 248 50.8
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 5.4e-51 205.7 240 50.4
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 9.3e-51 204.9 240 50.4
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 9.3e-51 204.9 231 50.2
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 1.2e-50 204.5 242 48.3
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.6e-50 204.1 239 51.5
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 1.6e-50 204.1 231 51.9
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 2.7e-50 203.4 239 47.7
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 2.7e-50 203.4 242 49.2
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 2.7e-50 203.4 187 56.7
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.7e-50 203.4 242 47.9
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 4.6e-50 202.6 234 51.7
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 6.0e-50 202.2 248 50.0
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.0e-49 201.4 246 52.0
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.0e-49 201.4 250 47.2
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 1.3e-49 201.1 240 50.4
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 2.3e-49 200.3 234 56.4
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 5.1e-49 199.1 241 49.0
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 6.6e-49 198.7 238 48.3
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 1.5e-48 197.6 198 53.0
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 1.9e-48 197.2 182 55.5
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.5e-48 196.8 242 47.1
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.3e-48 196.1 242 47.1
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.3e-48 196.1 242 47.1
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.6e-47 194.1 223 50.2
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 6.2e-47 192.2 232 48.7
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 1.8e-46 190.7 239 51.0
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 3.1e-46 189.9 187 54.0
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.2e-45 188.0 227 48.9
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 1.9e-43 180.6 232 53.0
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 1.2e-42 177.9 188 53.2
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 2.1e-42 177.2 225 51.6
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 2.7e-42 176.8 228 45.6
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 7.9e-42 175.3 256 47.7
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 7.9e-42 175.3 238 44.5
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 7.9e-42 175.3 200 48.5
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.3e-41 174.5 202 54.0
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.9e-41 172.9 113 74.3
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 5.1e-41 172.6 269 43.9
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.1e-40 171.4 269 43.5
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 1.4e-38 164.5 232 44.4
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 5.3e-38 162.5 189 46.0
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 5.3e-38 162.5 189 46.0
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 1.8e-30 137.5 237 38.0
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.4e-29 133.3 188 41.0
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 4.5e-29 132.9 228 37.3
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 2.2e-28 130.6 188 48.4
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 5.1e-25 119.4 111 54.1
AUR62042068 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.4e-24 115.5 65 95.4
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 2.8e-23 113.6 111 52.3
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.4e-14 84.0 204 41.7
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.4e-14 84.0 204 41.7
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-10 71.6 170 32.4
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 1.2e-10 71.6 170 32.4
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 1.6e-10 71.2 63 55.6
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 2.1e-10 70.9 170 32.4
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 8.8e-09 65.5 125 37.6
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 1.5e-08 64.7 168 38.7
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 9.7e-08 62.0 71 45.1
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 2.8e-07 60.5 135 32.6
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 4.8e-07 59.7 171 30.4
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 6.3e-07 59.3 66 51.5
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 1.1e-06 58.5 78 44.9
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 1.4e-06 58.2 83 42.2
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 7.0e-06 55.8 144 29.9


User provided reference genes

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